Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0573 ATGGTTGTGCAAAGAAGACTAACACTGAGTGCAGTTATAATCTTACTGTTCATTCAGTTAGGTTTTTGTTTGAATTCTAGAACAGAATGGTTATCATTACTTGAACTCCGTTCATCCTTAGGGATAAGGGGAAAATACTGGCCTATAAAAGCTGAACCGTGCCAGAACTGGACCGGGGTTCAGTGCCGGAACGGTCGAGTTATTGGGATCAATGTAGCTGGGTTGAAGCGAACCCGGTTCGGTCGTCTTGACCCAAGTTTCAATGTTGACGCTCTTGCCAATTTCACAATCTTAGCTTCATTCAATGCTTCTGGGTTCATGCTAAATGGGTCTATACCAGAGTGGTTTGGTCAAAATCATAGTGCACTCCAAGTGCTTGATCTAAGGTCTTGTTCTATAACAGGCTTGATTCCTGAGTCACTGAAGGGTTTGAGTGTGTTAAAGACTTTGTTACTTTCAGGGAATAGTTTGACTGGTAGAATACCTTCAAGTTTGGGATTGTTATCTGAGCTATCAGTTCTTGATCTCTCCGGAAATTCACTTTCAGGATCATTGCCTAACTCTTTGTGGAAGCTTGGTAATTTAACAAGCCTTGATCTCTCTTCTAATTTCTTATCAGGGTCTATTCCACCTGAACTGGGTTCCCTTTCGAATCTCCATATTTTGAACCTTTCGGACAATGGGCTCACTGGTTCGATCTCGATTCAACTTGGTTCCCTATCCAAGTTGGTTGAGCTTGATCTCGGGATGAATTCACTGTCTGGTTCATTGCCAGATAGTTTGTTTTCTAGAACTTTTGACATTAAAGTCCTCATTCTCAGTGGAAATATGTTTGGTGGTGCTCTTCCAAATTCATTGTGGTCATTGCCTAGCTTGCATTTTCTTGATTTGTCCAGAAACAACCTCACTGGTCCCCTACTGAAACTAGCAAACATTGGCTCTGATGGTGCCATATTCAATCTTTCAATCAATTTGTTCTATGGATCTTTGAATATTTCACTTAACAAGTTTAAAATGATCGATTTGTCCAGTAATTATTTGCAAGGTAAGGTGCAAGGTGGTGGTAATGTTACTCTATCTACGAATTGCTTACAGATGATTCCAGACCAGAGAGATTTGAGAGATTGTAGATTGTTTTATAGTCAGAGAAATTTACCCTTTACTCCTGGTGTCCAAGAACCAACTCAATCGCCGTTCCCAAAATCTGAGTCCTCGAACAACAAACGAATGATATTCATACTGGCAGGTACATTTGGTGGACTTGGCTTTATTGTGCTTGTAGTATTGGTCCTCATACTGGTTCTACAGCATTGTAGTAATCATAGTAATTTGGCAATTAGAAGAGGGACTGCGAACGGGGGACCTGTTCCAGAAGGAGAAAGTCCTATACCTCCCAAGGATCCTGTCTTTGTAACTGGTGTGGGAGAAGCATTTACTTTTGAGCAAATTCTTCATTTGACTGGTAATTTTGCTGAAGCAAATATCATCAAGCACGGTCATTCTGGAGACTTCTTTTGGGGACTCGTGGAAGGTGGAGCAACTGTGGTTGTCAAAAAAGTGGATTTAAATTTATTTAAGAGAGAGTCATACATTGTAGAATTGGGACTATTAAGCAAGGTTTCACATGCAAGATTGGTCCCGATCCTGGGGCACTGTTTGGAGAATGAGAACGAGAAATGTATAATTTACAAGTATATGCCGAATGGAGATTTGGCTACTTCCTTGCACAGAGTCCCCGGTTCAGATGGTAAATTACAGTCCCTGGATTGGATCACGAGATTGAAAATTGCAATAGGAGCTGCAGAAGGCCTAGCTTACCTACATGAGTGCAGCCCTCCCCTTGTTCACAGAGATGTCCAAGCTAGCAGTATACTTCTTGATGATAAATTTGAAGTGCGACTTGGAAGTTTGAGCGAGGTTACTTCCCAAGGAGATCTTCATCAGAGTGTCTTCTCAAGGCTTTTCAGCAAGCCGTTATCTTTTAATCAAGGAAATCCTGGTACATCATCTGTGACTTGTGACTTCGATGTCTATTGTTTTGGGAAGATTTTACTGGAGCTAGTTACTGGTAACCTTGATGTCAGTAATTCAGATGATGCCGCCACAAAAGAGTGGTTAGAACAAACCTTGTCTTACATAACCATATATGATAAAGAACGCGTGACTAAGATTTTAGACCCATCTTTGATAGTAGATGAGGACCTATTGGAAGAGGTATGGGCTATGGCAATTGTGGCTAGATCATGCCTAAATCCTAAGCCTTCGAAACGTCCTCTCATGAGACATGTCCTCAAAGCGCTGGAAAATCCCTTGAAGGTTGTCAGAGAAGACAATGGTAGTTCGGCAAGGTTGAGAACAACTTCATCTCGGAGATCTTGGAGCACTGCATTCTTCGGTAGTTGGAGACACAGCTCATCAGAGAATGCTGCTGCCACAGGGAATGCAAGGGAGGGTACTAGTAGTTTTAAACAATCAGAAAGAGTAGGTTCTCAGGGTAGTTCTGGAAATGATCACCCGTCTTCGCGTAAAAGGTCATCGAATGAAATATTCCCTGAACCATTGGAAATGCAAGAGGTGGAGTTTGCAGAGGCAAGATGA 2598 0.418 MVVQRRLTLSAVIILLFIQLGFCLNSRTEWLSLLELRSSLGIRGKYWPIKAEPCQNWTGVQCRNGRVIGINVAGLKRTRFGRLDPSFNVDALANFTILASFNASGFMLNGSIPEWFGQNHSALQVLDLRSCSITGLIPESLKGLSVLKTLLLSGNSLTGRIPSSLGLLSELSVLDLSGNSLSGSLPNSLWKLGNLTSLDLSSNFLSGSIPPELGSLSNLHILNLSDNGLTGSISIQLGSLSKLVELDLGMNSLSGSLPDSLFSRTFDIKVLILSGNMFGGALPNSLWSLPSLHFLDLSRNNLTGPLLKLANIGSDGAIFNLSINLFYGSLNISLNKFKMIDLSSNYLQGKVQGGGNVTLSTNCLQMIPDQRDLRDCRLFYSQRNLPFTPGVQEPTQSPFPKSESSNNKRMIFILAGTFGGLGFIVLVVLVLILVLQHCSNHSNLAIRRGTANGGPVPEGESPIPPKDPVFVTGVGEAFTFEQILHLTGNFAEANIIKHGHSGDFFWGLVEGGATVVVKKVDLNLFKRESYIVELGLLSKVSHARLVPILGHCLENENEKCIIYKYMPNGDLATSLHRVPGSDGKLQSLDWITRLKIAIGAAEGLAYLHECSPPLVHRDVQASSILLDDKFEVRLGSLSEVTSQGDLHQSVFSRLFSKPLSFNQGNPGTSSVTCDFDVYCFGKILLELVTGNLDVSNSDDAATKEWLEQTLSYITIYDKERVTKILDPSLIVDEDLLEEVWAMAIVARSCLNPKPSKRPLMRHVLKALENPLKVVREDNGSSARLRTTSSRRSWSTAFFGSWRHSSSENAAATGNAREGTSSFKQSERVGSQGSSGNDHPSSRKRSSNEIFPEPLEMQEVEFAEAR* 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0573 865 ProSiteProfiles Leucine-rich repeat profile. 194 216 IPR001611 GO:0005515
Lan10g0573 865 ProSiteProfiles cAMP/cGMP binding motif profile. 495 548 IPR000595 -
Lan10g0573 865 Pfam Protein tyrosine and serine/threonine kinase 498 765 IPR001245 GO:0004672|GO:0006468
Lan10g0573 865 MobiDBLite consensus disorder prediction 807 865 - -
Lan10g0573 865 Gene3D Ribonuclease Inhibitor 265 362 IPR032675 -
Lan10g0573 865 Gene3D Ribonuclease Inhibitor 185 264 IPR032675 -
Lan10g0573 865 MobiDBLite consensus disorder prediction 807 840 - -
Lan10g0573 865 SUPERFAMILY L domain-like 54 353 - -
Lan10g0573 865 SUPERFAMILY Protein kinase-like (PK-like) 467 767 IPR011009 -
Lan10g0573 865 PRINTS Leucine-rich repeat signature 171 184 - -
Lan10g0573 865 PRINTS Leucine-rich repeat signature 289 302 - -
Lan10g0573 865 PANTHER RECEPTOR-LIKE PROTEIN 55 5 261 - -
Lan10g0573 865 PANTHER RECEPTOR-LIKE PROTEIN 55 281 824 - -
Lan10g0573 865 Pfam Leucine Rich Repeat 194 216 IPR001611 GO:0005515
Lan10g0573 865 Gene3D Transferase(Phosphotransferase) domain 1 566 788 - -
Lan10g0573 865 SMART LRR_typ_2 192 216 IPR003591 -
Lan10g0573 865 SMART LRR_typ_2 168 191 IPR003591 -
Lan10g0573 865 SMART LRR_typ_2 240 264 IPR003591 -
Lan10g0573 865 Gene3D Phosphorylase Kinase; domain 1 468 565 - -
Lan10g0573 865 ProSiteProfiles Protein kinase domain profile. 490 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0573 865 Pfam Leucine rich repeat 122 181 IPR001611 GO:0005515
Lan10g0573 865 Pfam Leucine rich repeat 242 302 IPR001611 GO:0005515
Lan10g0573 865 Gene3D Ribonuclease Inhibitor 28 184 IPR032675 -
Lan10g0573 865 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 281 824 - -
Lan10g0573 865 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 5 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0573 Lan-Chr10 4824534 4829828 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Lan10g0573 PK_Tyr_Ser-Thr 9e-20 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0573 10 4824534 4829828 Lan5g0430 5 9311938 9316704 LSH