Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0572 ATGACGGAACAAGGCGAAGCTACTACCACTGTCACCACCACCACTACCACTACCAAAGTTCAGATACATCACACTCGAATAATGCTTCCGGATTTTCTCCAAACTATAAATCTCAAACATGTGAAATTAGGTTACCATTACCTCATCTCTAATTTGTTCACTTTATGTCTCCTTCCTCTAATCATAATTACCTTAATCCAAGTTTCCAAAACTGACTTTCACTACTTATGGCTCCATCTTCAGTATAACCTCCTCACTATCCTCACCTGCTCCGCCTTCTTAGTCTTCGGCCTAACTGTCTTCGCCTTCACACGACCTCGCGTCATTTACCTCCTTGACTACTCTTGTTTTCGCCCTGCTGATAACCTCAAAGCGCCTTTTCGTAGTTTCATGGAGCACTCTCGCCTGACCGGGGACTTTGATGAGTCCTCGCTCGAGTTCCAACGCAAAATACTCATGCGTGCTGGACTCGGGGAGGAGACATATGTCCCCGAGGCCATGCACTCTGTTCCTCCTCGGCCTTCTATGACCGCAGCCAGGGCCGAGGCGAAGGAGGTTATGTTTGGTGCTTTGGATAATCTGTTCCAGAACACCAAACTGAAGCCCAAGGATATTGGCATACTTGTTGTGAATTGTAGTTTGTTTAACCCTACACCTTCGTTGTCTGCTATGATTGTTAATAAATATAAATTGAGGGGTAACATTTTGAGCTTTAACTTAGGGGGAATGGGGTGCAGTGCTGGGGTTATTGCAGTTGATCTTGCTAAGGATTTGTTGCAGGTTCACCGGAATACTTATGCTGTCGTTGTTAGTACCGAGAATATTACTCAGAATTGGTATTTCGGGAAGAAGAAATCGATGCTCATACCTAATTGTTTGTTTAGAGTTGGATGTTCTGCTGTTTTGCTATCCAATAAGTCTTCTGATAGGAAGAGGGCAAAGTATAGGTTAGTCCATGTTGTGAGGACGCATTGCGGGGCTGATGATAAAGCCTTTCGATGCGTTTATCAGGAACAGGATGATGCCGGAAAGACTGGTGTTTCTTTGTCTAAAGATTTGATGGCAATAGCTGGTGGGGCACTTAAGACCAATATTACAACTCTTGGCCCTCTTGTGCTCCCAATTAGTGAGCAGCTTCTGTTTTTCACTACCTTGTTGATGAAGTTGTTTAAGGCTGATGTGAAGCCTTACATACCGGATTTTAAGCTCGCGTTAGATCATTTCTGCATACATGCTGGGGGAAGGGCAGTGATTGATGAGTTGGAGAAGAATCTCCAGCTGCTTCCAGTTCATGTTGAGGCTTCTAGGATGACTCTTCACCGTTTCGGGAACACTTCGTCTAGCTCCATTTGGTATGAGTTGGCATATATGGAAGCCAAATGGAGGATAAGAAAGGGCAACATGGTTTGGCAAATTGCATTTGGAAGTGGGTTTAAATGTAATAGTGCAGTGTGGGAGGCACTTTGTAATGTGAATCCATCTCCCAATGGACCTTGGCATGATTGCATTGATAAGTATCCTGTGGATTTAGCCATCTAG 1539 0.4431 MTEQGEATTTVTTTTTTTKVQIHHTRIMLPDFLQTINLKHVKLGYHYLISNLFTLCLLPLIIITLIQVSKTDFHYLWLHLQYNLLTILTCSAFLVFGLTVFAFTRPRVIYLLDYSCFRPADNLKAPFRSFMEHSRLTGDFDESSLEFQRKILMRAGLGEETYVPEAMHSVPPRPSMTAARAEAKEVMFGALDNLFQNTKLKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNILSFNLGGMGCSAGVIAVDLAKDLLQVHRNTYAVVVSTENITQNWYFGKKKSMLIPNCLFRVGCSAVLLSNKSSDRKRAKYRLVHVVRTHCGADDKAFRCVYQEQDDAGKTGVSLSKDLMAIAGGALKTNITTLGPLVLPISEQLLFFTTLLMKLFKADVKPYIPDFKLALDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYMEAKWRIRKGNMVWQIAFGSGFKCNSAVWEALCNVNPSPNGPWHDCIDKYPVDLAI* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0572 512 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 405 486 IPR013747 -
Lan10g0572 512 Pfam FAE1/Type III polyketide synthase-like protein 103 388 IPR013601 GO:0006633|GO:0016020|GO:0016747
Lan10g0572 512 CDD CHS_like 91 485 - -
Lan10g0572 512 PANTHER 3-KETOACYL-COA SYNTHASE 4 22 511 - -
Lan10g0572 512 SUPERFAMILY Thiolase-like 318 486 IPR016039 GO:0016746
Lan10g0572 512 SUPERFAMILY Thiolase-like 95 312 IPR016039 GO:0016746
Lan10g0572 512 Gene3D - 132 487 IPR016039 GO:0016746
Lan10g0572 512 PIRSF Very_long_ch_3-ktacl-CoA_syn 31 512 IPR012392 GO:0006633|GO:0016020|GO:0016747
Lan10g0572 512 PANTHER 3-KETOACYL-COA SYNTHASE 22 511 IPR012392 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0572 Lan-Chr10 4783296 4785404 Dispersed/Wgd