Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0560 ATGTCTGAACCGCTTGATCGGTTCGAACGCCCTTGCTTGGAAGGCTTATCTGGTAATGAAGAGAAAAGAGAGCGGAAATCGGATTTTGAGAATTCAGAGGATGATCGGAAGACACGTATTGGCACCCTGAAAAAGAGAGCAATCAATGCATCCAGCAAATTCAGGCATTCTCTTAAGAAAAGCAGCAGGAGAAAGAGTGCGAGCAACTCTGTCTCCATCGAGGACATTCGAGATGTTAAGGAACTCCAAGCAGTGGATGCTTTTCGTCAGGCACTTATGTTGGATAATTTATTGTCCGCAAGACATGATGACTATCATATGTTATTGAGATTCTTGAAAGCGCGGAAACTTGATATTGAGAAAGCAAAGCAAATGTGGGCCAACATGATTCAATGGAGGAAAGAGTATGGTACCGATACAATTATGGAGGATTTTGAGTTCAGTGAGTTGGATGAAGTTCTGGAGTATTATCCACATGGTTATCATGGAGTGGATAAGGAAGGAAAACCTATTTATATTGAGAGGTTAGGTAAAGTTGACCCCAATAAGCTAATGCAAGTAACTACCATGGATAGGTATTTAAGATACCATGTGCAGGGTTTTGAGAAAACATTTGCTATTAAGTTTCCTGCGTGTTCTATTGCTGCAAAGAGGCATATAGATTCAAGTACAACCGTTTTGGATGTTCAAGGCGTGGGTTTCAAAAATTTTACCAAGTCTGCACGGGAACTCATCATGCGGCTGCAGAAGATTGATGGTGACTACTATCCTGAAACATTATGCCGAATGTTTATAATCAATGCTGGTCCTGGTTTTAAGCTGCTCTGGAACACAGTGAGGACATTTCTTGACCCCAAAACTACTTCCAAAATAAATGTTCTTGGAAACAAGTTCCAGAGTAAATTACTTGAGATTATCGATGTGAGTGAGCTACCAGAATTTCTAGGTGGTACTTGCACTTGTATAGATCAAGGTGGTTGTTTGAGGTCTGATAAAGGACCTTGGCAAGACAAAAACATTTTGAAGATGGTTCTTAGTGGTGAAGCAAAGTGTTCTAGACAAATTGTAACAGTTTCTAACGAGGAGGGGACAGTGGTTGAATGTGATAAGACAAGTTGTTCAATGGTCTTTGAAACTTGGAAGCAGATAAAAAGTAGTGATACATCTACAGCAGAATCAGGATCTGAAGTTGAAGATATCACTTCTCCCAAAGCAAATGGGAATTATATAATCCCTCGGTTGACTCCTGTCCATGAAGAAACAAGATTGGTTCATAAGGCTAGCCAAGCTGGCGGTTTCTCTGACTATGTTCCCATGGTTGACAAGCCTGTCGATCTTGCATGGAAGGAGAATCAATTGGCATCTTTAAAGTCATCTGGATCCACAGAAAAAATACTATTGACTAATGGAAGATCTGCTGGTAATCGTTGTGCAAATATCTGCGCTATTATAGTGGGCTATTTTTTTGCCATCTTTACATTTGTTATTTCAGTAGCATCTCCTGCCACTAAGAGAATAAGAGACTCTGAACCTGATGCTGCGCAAAATGTGCCTAGCATAAGTGCTGATTCAACATACAAGGACTCTTTTCCCCCTTCTGGAGCAACAAAGGTTGAACTTGCCTCATCTGATTTGAAACGCATTGGTGAGCTTGAAGAGAAGATTGACATGCTTCACTCAAAACCTAATGTGATGCCATCTGAGAAAGAAGAGCTTCTGAATGCTGCGGTTTATCGTGTGGATGCATTGGAAGCTGAACTAATTGGCACTAAGAAGGCTTTATATGAAGCTTTGATAAGACAAGAAGAACTTCTGGCGTATGTTGACAGATGGGAAATAAACAATTCAAAGAAAAGTAAGAAGTTTTTCTGTTGA 1875 0.4032 MSEPLDRFERPCLEGLSGNEEKRERKSDFENSEDDRKTRIGTLKKRAINASSKFRHSLKKSSRRKSASNSVSIEDIRDVKELQAVDAFRQALMLDNLLSARHDDYHMLLRFLKARKLDIEKAKQMWANMIQWRKEYGTDTIMEDFEFSELDEVLEYYPHGYHGVDKEGKPIYIERLGKVDPNKLMQVTTMDRYLRYHVQGFEKTFAIKFPACSIAAKRHIDSSTTVLDVQGVGFKNFTKSARELIMRLQKIDGDYYPETLCRMFIINAGPGFKLLWNTVRTFLDPKTTSKINVLGNKFQSKLLEIIDVSELPEFLGGTCTCIDQGGCLRSDKGPWQDKNILKMVLSGEAKCSRQIVTVSNEEGTVVECDKTSCSMVFETWKQIKSSDTSTAESGSEVEDITSPKANGNYIIPRLTPVHEETRLVHKASQAGGFSDYVPMVDKPVDLAWKENQLASLKSSGSTEKILLTNGRSAGNRCANICAIIVGYFFAIFTFVISVASPATKRIRDSEPDAAQNVPSISADSTYKDSFPPSGATKVELASSDLKRIGELEEKIDMLHSKPNVMPSEKEELLNAAVYRVDALEAELIGTKKALYEALIRQEELLAYVDRWEINNSKKSKKFFC* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0560 624 Gene3D - 137 348 IPR036865 -
Lan10g0560 624 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 149 323 IPR001251 -
Lan10g0560 624 MobiDBLite consensus disorder prediction 1 42 - -
Lan10g0560 624 CDD SEC14 150 318 IPR001251 -
Lan10g0560 624 SMART CRAL_TRIO_N_2 104 129 IPR011074 -
Lan10g0560 624 Pfam CRAL/TRIO domain 155 317 IPR001251 -
Lan10g0560 624 SUPERFAMILY CRAL/TRIO N-terminal domain 80 145 IPR036273 -
Lan10g0560 624 Gene3D - 19 136 - -
Lan10g0560 624 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 3 615 - -
Lan10g0560 624 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 3 615 - -
Lan10g0560 624 PRINTS Cellular retinaldehyde-binding protein signature 107 129 - -
Lan10g0560 624 PRINTS Cellular retinaldehyde-binding protein signature 276 295 - -
Lan10g0560 624 PRINTS Cellular retinaldehyde-binding protein signature 309 318 - -
Lan10g0560 624 SUPERFAMILY CRAL/TRIO domain 149 343 IPR036865 -
Lan10g0560 624 Pfam CRAL/TRIO, N-terminal domain 102 128 IPR011074 -
Lan10g0560 624 SMART sec14_4 149 320 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0560 Lan-Chr10 4643829 4649060 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0560 10 4643829 4649060 Lan3g0472 3 4324615 4329882 LSH