Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0551 ATGATGAGTGCATGCATCAACTTTTCGCTTATCCATTCATCATCGTCTCCTCCAGTTACACTTCCTCAAAAACCATTCCTTATCCACTCTCTCACTCTCACCAATTTGAGAAAACAAAAACAACACTCTTTCAAGGTTCTCCAACGCGACTTCGAAACACTCTCCTCCTCTGATGCCAACGACGCCGTTTCATCTCAAAACGCAAACCTCGAGGTTCAGTTCGAAACAGATCCTCCACTACTTCCTCAAATCAATGGAGTTGTTGAAGACAGAGGAAAAAGTAGAATTAGGAAGAAGAAAGAAGAAGAAGATAACAACATCGATGATAATCGCTTCAAGCTCCGCAATGGAAGGGAGGTTTTCGAAGAGAAAGCTTACATCGTAGGAGTTGAGCGCAAAGGTGATGTACAGGATTTTGGTATACAAGAATCTTTGAGTGAATTGGAACAGTTAGCGGATACTGCTGGATTGAGAGTTGTTGGCTCTACATACCAGAAGCTTGCTTCTCCAAACCCAAAGACATACATTGGCTCTGGAAAGGTTTCTGAAATTAAGAGTGCAATTCATGCATTGGATGTTGAAACTGTGATCTTCGATGATGAGCTTTCAGCTGGGCAATTGCGCAACTTGGAAAAGGTTTTTGGTGGAGATGTGAGAGTTTGTGATCGAACTGCTCTTATCCTTGATATATTCAACCAGCGAGCAGCAACACATGAAGCATCTTTACAGGTTTCATTAGCACAAATGGAATACCAACTACCTCGTCTAACAAAAATGTGGACTCATCTTGAGCGTCAATCAGGAGGAAAGGTGAAGGGAATGGGAGAAAAACAAATAGAAGTGGACAAGCGTATTTTGCGTAACCAAATTGGTGTTCTTAGGAAAGAGCTAGAATCTGTTAGGAAACACCGAAAACAGTACCGTAACAGGCGTTTGTCAGTACCTGTTCCAGTGGTGTCCTTGGTTGGTTACACGAATGCTGGTAAGAGTACACTTTTGAATCAATTGACTGGAGCAGATGTTCTTGCCGAGGATAAATTATTTGCAACCTTAGATCCAACTACAAGGAGGGTACAGATGGAGAATGGAAAGGAGTTTCTCCTAACAGACACTGTTGGTTTTATTCAGAAGTTACCAACTACACTAGTTGCTGCCTTCAGAGCTACCCTGGAGGAGATATCAGAATCATCACTTTTGGTACATGTGGTTGATATCAGTCACCCTATGGCTGAGCAACAGATAAATGCTGTGGACAAAGTTCTATCAGAACTAGATGTATCGTCAATTCCAAGATTAATGGTCTGGAACAAGGTTGATAAGACTAGCGATCCCCAGAAAATCAGGCTACAAGCTGAAGAAAGAGATGTTGTTTGCATATCTGCTTTAAGTGGTGATGGCTTATCAGAATTCTGTAATGCAGTTAACGACAAACTAAAGGATTCCATGGTATGGGTAGAAGCTTTGGTCCCATTTGAAAACGGGGACCTTCTCAGCACTATACACCAAGTTGGAATGGTTGAGAAAACTGAATACACAGAGCAGGGGACATACATCAAGGCACATGTGCCCCTACGTTTTGCAAGATTGCTTACACCTATGAGGCAACTGTGCGTATCACGAAATTAA 1626 0.4207 MMSACINFSLIHSSSSPPVTLPQKPFLIHSLTLTNLRKQKQHSFKVLQRDFETLSSSDANDAVSSQNANLEVQFETDPPLLPQINGVVEDRGKSRIRKKKEEEDNNIDDNRFKLRNGREVFEEKAYIVGVERKGDVQDFGIQESLSELEQLADTAGLRVVGSTYQKLASPNPKTYIGSGKVSEIKSAIHALDVETVIFDDELSAGQLRNLEKVFGGDVRVCDRTALILDIFNQRAATHEASLQVSLAQMEYQLPRLTKMWTHLERQSGGKVKGMGEKQIEVDKRILRNQIGVLRKELESVRKHRKQYRNRRLSVPVPVVSLVGYTNAGKSTLLNQLTGADVLAEDKLFATLDPTTRRVQMENGKEFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVVDISHPMAEQQINAVDKVLSELDVSSIPRLMVWNKVDKTSDPQKIRLQAEERDVVCISALSGDGLSEFCNAVNDKLKDSMVWVEALVPFENGDLLSTIHQVGMVEKTEYTEQGTYIKAHVPLRFARLLTPMRQLCVSRN* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0551 541 Gene3D - 316 483 IPR027417 -
Lan10g0551 541 PANTHER GTP-BINDING PROTEIN 6-RELATED 98 526 - -
Lan10g0551 541 Pfam GTP-binding GTPase Middle Region 234 311 IPR032305 -
Lan10g0551 541 ProSiteProfiles HflX-type guanine nucleotide-binding (G) domain profile. 317 482 IPR030394 GO:0005525
Lan10g0551 541 TIGRFAM small_GTP: small GTP-binding protein domain 318 472 IPR005225 GO:0005525
Lan10g0551 541 Pfam GTP-binding GTPase N-terminal 143 231 IPR025121 -
Lan10g0551 541 CDD HflX 276 478 IPR030394 GO:0005525
Lan10g0551 541 Coils Coil 290 310 - -
Lan10g0551 541 Gene3D - 135 234 IPR042108 -
Lan10g0551 541 PRINTS GTP1/OBG GTP-binding protein family signature 319 339 IPR006073 GO:0005525
Lan10g0551 541 PRINTS GTP1/OBG GTP-binding protein family signature 386 404 IPR006073 GO:0005525
Lan10g0551 541 PANTHER GTP-BINDING PROTEIN HFLX 98 526 IPR016496 GO:0005525
Lan10g0551 541 TIGRFAM GTP_HflX: GTP-binding protein HflX 125 477 IPR016496 GO:0005525
Lan10g0551 541 Pfam 50S ribosome-binding GTPase 319 437 IPR006073 GO:0005525
Lan10g0551 541 Gene3D - 235 302 - -
Lan10g0551 541 Hamap GTPase HflX [hflX]. 145 507 IPR016496 GO:0005525
Lan10g0551 541 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 317 488 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0551 Lan-Chr10 4566715 4572202 Dispersed