Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0550 ATGGAAACCATCTCAGTTTCCAAGCTTCTAACACTGTACTTCTTCACTGTCTTGTTTCTGTGTTCTAATTTGATCCAATGTAGTGTCACATATGATAGGAAAGCCATTGTTATCAATGGCCAAAGGAGAATCCTCATCTCTGGTTCCATTCACTATCCTAGAAGCACCCCTGAAATGTGGGAGGATCTAATTGAAAAAGCCAAACATGGAGGCCTTGATGTCATTGACACTTATGTCTTCTGGAATGTTCATGAACCTTCACCTGGCAATTACAATTTTGAAGGAAGATATAATCTGGTACGGTTCATTAAGACAGTGCAGAAAGTGGGGCTCTATGTCCATCTTCGCATTGGACCTTATGTATGTGCTGAGTGGAACTTTGGAGGATTTCCTGTTTGGTTGAAGTATGTTCCTGACATCAGCTTCAGAACAGATAATGGTCCTTTTAAGGCAGCAATGCAAGGTTTCACTCAGAAAATTGTCCAAATGATGAAAAATGAAAAGCTATTTCAATCTCAGGGTGGTCCAATTATTCTTTCTCAGATTGAGAATGAGTTTGGACCAGTAAGCAAGGCACTAGGTGCTGCTGGTCTTTCATACACAAACTGGGCTGCAAAGATGGCTGTTGGATTGGGTACAGGAGTCCCCTGGGTGATGTGCAAGGAAGACGATGCTCCTGATCCGGTGATAAATGCTTGTAATGGTTTTTACTGTGATTATTTCACTCCAAATAAACCATACAAGCCAACGCTATGGACTGAGGCTTGGAGTGGCTGGTTTACAGAATTTGGTGGTCCAATTGTTCAGCGACCAGTTGAGGATCTAGCATTTGCAGTTGCTCGTTTCTTACAAAAGGGTGGCTCATATTTCAATTATTACATGTATCATGGAGGAACTAACTTCGGACGATCGGCTGGAGGTCCATTCATTACTACAAGCTATGACTATGATGCTCCAATTGATGAATATGGTTTGCTCAGGCAACCTAAGTATACTCATTTGAAGGACCTTCATAGAGCTATCAAGCAATGTGAACATGCTTTGGTTTCTTCAGATCCTACTGTTATATCATTAGGAACCTATGAGCAGGCTCATGTATTCTCTTCCGGGACTGGAAAATGCGCAGCATTTTTAGCAAACTATCATTCAAATTCTTCTGCTAGCGTGACATTCAATAACAGGCACTATGACTTGCCTGCTTGGTCCATAAGCATCCTCCCTGATTGCGTAACAGATGTATTCAACACTGCAAGAGTGAGGGTTGGAACGTCACAAATACGAATGGTGCCTAGCAATTCTAAGGTCTTATCATGGGAGACCTATAATGAAGATATATCTTCCCTAGAGGAAAGTTCAAAGATAACAGCTTCTGGACTTATAGAACAGTTAAATGCTACCAGAGACAGTAGTGATTATCTGTGGTACATAACCAGTGTTGACATAAGTCCATCTGAATCGTTTCTTCGAGGAGGACTCAACAAGCTCAGCATTAGTGTGAATTCTGCAGGCGATGCAGTCCATGTGTTTATTAATGGGCAATTTTTAGGCTCAGCTTTTGGGACAAATGAACAGAGAAGTTTCACATTTAACGGCCCTGCGAACTTACGCGCTGGAACTAACAAAATAGCACTTCTCAGCGTAGCTGTTGGATTACCGAATGTTGGATTCCACTTTGAAACATGGAAGACAGGTATCATCGGTCCGGTTTTGCTCCATGGTCTTGATCATGGACAGAAAGATTTGACATGGCAGAAATGGTCATACCAGGTTGGCCTAAAAGGAGAGGCTATGAATTTGGTGTCTCCAAATGGTGTCTCATCTGTTGATTGGTTCATAGAGTCACTAGCTACACAAGGCCAGCCACAGTTGAAATGGCATAAGGCTTATTTCAATGCACCTGATGGAGTTGAACCATTGGCTTTGGACTTGGGAAGTATGGGAAAGGGTCAAGTATGGATCAATGGACAAAGCATAGGAAGATATTGGATGGTTTATGCAAAGGGTGCTTGTAATTCTTGCAACTATGCTGGGACATACCGACCCGTAAAGTGCCAACTTGGTTGTGGAAATCCCTCCCAACGATGGTATCATGTTCCAAGGTCGTGGTTAAAGCCAACAAATAACTTGATGGTAGTTTTTGAGGAACTAGGAGGGAATCCTTGGAAAATATCTCTGGTAAAGAGGACAATACATACTCAAATTTCTAGTGAACCCAATACAAAGAACTGA 2229 0.4199 METISVSKLLTLYFFTVLFLCSNLIQCSVTYDRKAIVINGQRRILISGSIHYPRSTPEMWEDLIEKAKHGGLDVIDTYVFWNVHEPSPGNYNFEGRYNLVRFIKTVQKVGLYVHLRIGPYVCAEWNFGGFPVWLKYVPDISFRTDNGPFKAAMQGFTQKIVQMMKNEKLFQSQGGPIILSQIENEFGPVSKALGAAGLSYTNWAAKMAVGLGTGVPWVMCKEDDAPDPVINACNGFYCDYFTPNKPYKPTLWTEAWSGWFTEFGGPIVQRPVEDLAFAVARFLQKGGSYFNYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLLRQPKYTHLKDLHRAIKQCEHALVSSDPTVISLGTYEQAHVFSSGTGKCAAFLANYHSNSSASVTFNNRHYDLPAWSISILPDCVTDVFNTARVRVGTSQIRMVPSNSKVLSWETYNEDISSLEESSKITASGLIEQLNATRDSSDYLWYITSVDISPSESFLRGGLNKLSISVNSAGDAVHVFINGQFLGSAFGTNEQRSFTFNGPANLRAGTNKIALLSVAVGLPNVGFHFETWKTGIIGPVLLHGLDHGQKDLTWQKWSYQVGLKGEAMNLVSPNGVSSVDWFIESLATQGQPQLKWHKAYFNAPDGVEPLALDLGSMGKGQVWINGQSIGRYWMVYAKGACNSCNYAGTYRPVKCQLGCGNPSQRWYHVPRSWLKPTNNLMVVFEELGGNPWKISLVKRTIHTQISSEPNTKN* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0550 742 Gene3D - 293 414 - -
Lan10g0550 742 SUPERFAMILY Galactose-binding domain-like 584 731 IPR008979 -
Lan10g0550 742 PANTHER BETA-GALACTOSIDASE RELATED 4 733 IPR001944 GO:0004553|GO:0005975
Lan10g0550 742 Gene3D Glycosidases 21 292 - -
Lan10g0550 742 SUPERFAMILY Galactose-binding domain-like 403 575 IPR008979 -
Lan10g0550 742 Pfam Glycosyl hydrolases family 35 36 340 IPR031330 -
Lan10g0550 742 PANTHER BETA-GALACTOSIDASE 4 733 - -
Lan10g0550 742 Pfam Beta-sandwich domain in beta galactosidase 348 419 IPR041392 -
Lan10g0550 742 Gene3D - 603 735 - -
Lan10g0550 742 SUPERFAMILY (Trans)glycosidases 28 345 IPR017853 -
Lan10g0550 742 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 174 186 IPR019801 GO:0004553|GO:0005975
Lan10g0550 742 Gene3D - 439 588 - -
Lan10g0550 742 PRINTS Glycosyl hydrolase family 35 signature 39 56 IPR001944 GO:0004553|GO:0005975
Lan10g0550 742 PRINTS Glycosyl hydrolase family 35 signature 60 78 IPR001944 GO:0004553|GO:0005975
Lan10g0550 742 PRINTS Glycosyl hydrolase family 35 signature 115 134 IPR001944 GO:0004553|GO:0005975
Lan10g0550 742 PRINTS Glycosyl hydrolase family 35 signature 172 187 IPR001944 GO:0004553|GO:0005975
Lan10g0550 742 PRINTS Glycosyl hydrolase family 35 signature 251 266 IPR001944 GO:0004553|GO:0005975
Lan10g0550 742 PRINTS Glycosyl hydrolase family 35 signature 288 303 IPR001944 GO:0004553|GO:0005975
Lan10g0550 742 PRINTS Glycosyl hydrolase family 35 signature 308 324 IPR001944 GO:0004553|GO:0005975
Lan10g0550 742 PRINTS Glycosyl hydrolase family 35 signature 621 635 IPR001944 GO:0004553|GO:0005975
Lan10g0550 742 PRINTS Glycosyl hydrolase family 35 signature 648 664 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0550 Lan-Chr10 4544833 4550389 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0550 10 4544833 4550389 Lan3g0462 3 4195539 4201458 LSH
Lan10g0550 10 4544833 4550389 Lan3g1258 3 24675537 24681262 PCT
Lan3g1258 3 24675537 24681262 Lan10g0550 10 4544833 4550389 PCT