Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0546 ATGTCTGATTCTTCTAGGAGAATGTGGTGCTTCGTGCCCGAACGGTTTCAACTGCATGTGGCCATGTTGCTCACACAGTTTTGCTTTGCTGGATTTCATGTGCTATCTCGAAATGCCCTTAACATGGGCGTCAACAAATTCGTTTTCCCAGTCTATAGGAACCTCATTGCTCTTGTTCTACTCCTTCCTTTTGCCTACTTCTTGGAAAAGAAGGAGAGGCCAGCGATTACTTTAAACTTCCTCGGCCAGTTCTTTCTTCTAGCACTTGTCGGGGTTACAGCAAATCAAGGTTTATACTTGCTTGGGTTGGAGAACACATCCCCTACCTTCGTATCAGCAATACAAAACTCCGTCCCAGCCATTACATTTCTCATGGCAGTCATACTCAGGATAGAGCAAGTGAAGCTGAAGAGAAAAGATGGGGTGGCTAAGGTAGCAGGAACCATATTCTGTGTAGCTGGGGCTACAGTGATTACATTTTACAAGGGTCCAACAATATATAGTCCAACTAAACCACTACTTAACAGCATCATCACAACAATTACAACACCACAAGTATTTGATTTTGGGTCAGTCTCAGTTGGAGATGCAAAGGAAAAGAACTGGATCCTTGGTTGCTTCTACCTCATAGGACATTGCTTGTCTTGGGCTGGTTGGCTTGTGTTTCAAACACCTCTCCTTAAAAAATTCCCTGCTCGCCTCTCTGTCACTTCCTACACTTTTTTCTTTGGACTCTTGCAATTTCTTCTTATTGCTTTGATCTTTGAAAGAGATGCAAAGGCTTGGGTTTTTCACTCTGCTCAAGAAGCTTTGACAATTTTATACGGGGGAGTGGTGATATCAGGAATTGCCTTTACTGTACAGATATGGTGCATTGACCGAAGTGGTCCTGTATTCGTCGCTATGTTTCAGCCTGTACAGACTTTCGTTGTTGCACTTTTTGCTTCACTTGCTTTAGGCGAAGAATTCCACTTGGGAGGGCTCATTGGGGCAGTGTTGGTTGTAGTGGGACTGTACCTAGTCTTACGGGGTAGGAGTGAAGAGAAGAAATTTGCAATGAAACAACTTGCAATTGCAGAACGTAGCATCCTTAGACCTGCAAGCCATGACAAATCATCACTTACTCAGCCACTCCTCCCATCATCAACACAAAATGTTTGA 1161 0.4367 MSDSSRRMWCFVPERFQLHVAMLLTQFCFAGFHVLSRNALNMGVNKFVFPVYRNLIALVLLLPFAYFLEKKERPAITLNFLGQFFLLALVGVTANQGLYLLGLENTSPTFVSAIQNSVPAITFLMAVILRIEQVKLKRKDGVAKVAGTIFCVAGATVITFYKGPTIYSPTKPLLNSIITTITTPQVFDFGSVSVGDAKEKNWILGCFYLIGHCLSWAGWLVFQTPLLKKFPARLSVTSYTFFFGLLQFLLIALIFERDAKAWVFHSAQEALTILYGGVVISGIAFTVQIWCIDRSGPVFVAMFQPVQTFVVALFASLALGEEFHLGGLIGAVLVVVGLYLVLRGRSEEKKFAMKQLAIAERSILRPASHDKSSLTQPLLPSSTQNV* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0546 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 241 346 - -
Lan10g0546 386 Pfam EamA-like transporter family 21 159 IPR000620 GO:0016020|GO:0016021
Lan10g0546 386 Pfam EamA-like transporter family 204 342 IPR000620 GO:0016020|GO:0016021
Lan10g0546 386 PANTHER WAT1-RELATED PROTEIN 12 356 IPR030184 GO:0016021|GO:0022857
Lan10g0546 386 PANTHER WAT1-RELATED PROTEIN 12 356 - -
Lan10g0546 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0546 Lan-Chr10 4489452 4494994 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0546 10 4489452 4494994 Lan5g0441 5 9623596 9627772 LSH
Lan10g0546 10 4489452 4494994 Lan3g0459 3 4173562 4177115 LSH
Lan10g0546 10 4489452 4494994 Lan3g1263 3 24698553 24701201 PCT
Lan3g1263 3 24698553 24701201 Lan10g0546 10 4489452 4494994 PCT