Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0543 ATGAAGATCCACTGCGACGTTTGCACCAAAAACGACGCTTCTCTTTTCTGCACCGCCGATGAAGCTGCACTCTGTGACTCCTGCGACCACCGTGTCCACCATGCCAATAAACTCGCCTCCAAGCACCACCGCTTCTCTCTTCACCACCCTTCTTCAAACCAATACCCTCTCTGCGACATTTGCCAGGAGAAAAAAGCATTTGTGTTTTGCCAACAAGATAGAGCGATTTTGTGTGGAGAGTGTGATGTATCTATTCATTCTGCAAATGAACACACTCGGAAACATGATAGGTTTCTTCTCACCGGGGTTAAGCTCTCAGCTTCTGCTAAAGTGTATTCATCAAATGATTCCAATTCAATTAAGTTATCACAGTCTTCTGTGAAAAATTCATATCCAATAACACCTTTGATGCCTTATAAGTCAACTCCTTCACCAGCATCAACAGTTCCCAAGGCTATTGATGGAGCTGGTTCAACAAACACTAGTAGCATATCTCAGTATTTGATAGAAACTATTCCTGGATGGCAAGTTGATGATTTTCTTGATTCATCTTCTGGTTCCATCAGTTTCTCTAAGAGTAATGACATGTTGCCATTGTTTGATGCTGATATTGAAGAGAATCTGGGTACCTTCTCAGGGATCTGGGTTCCTCAAGCACCACCACCTCCTCTATATTCTTTTTCACAAATGGATAAGCAAATTGAGAATAGAGAGACAGATTATGGTATCAACATGAAAGGCAGCAACAGTTCAAGGTTGAGGGATGATAATAATTTCATAGTTCCACAGATTAGCCCTGTCTCCAATTCCAAAAGACCCAGATTTCTATGGTAG 834 0.4185 MKIHCDVCTKNDASLFCTADEAALCDSCDHRVHHANKLASKHHRFSLHHPSSNQYPLCDICQEKKAFVFCQQDRAILCGECDVSIHSANEHTRKHDRFLLTGVKLSASAKVYSSNDSNSIKLSQSSVKNSYPITPLMPYKSTPSPASTVPKAIDGAGSTNTSSISQYLIETIPGWQVDDFLDSSSGSISFSKSNDMLPLFDADIEENLGTFSGIWVPQAPPPPLYSFSQMDKQIENRETDYGINMKGSNSSRLRDDNNFIVPQISPVSNSKRPRFLW* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0543 277 PANTHER B-BOX ZINC FINGER PROTEIN 19 1 274 - -
Lan10g0543 277 Pfam B-box zinc finger 53 93 IPR000315 GO:0008270
Lan10g0543 277 CDD Bbox1_BBX-like 57 100 - -
Lan10g0543 277 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Lan10g0543 277 SMART bboxneu5 4 47 IPR000315 GO:0008270
Lan10g0543 277 SMART bboxneu5 53 100 IPR000315 GO:0008270
Lan10g0543 277 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 274 - -
Lan10g0543 277 CDD Bbox1_BBX-like 5 47 - -
Lan10g0543 277 Gene3D Classic Zinc Finger 1 96 - -
Lan10g0543 277 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0543 Lan-Chr10 4405765 4407389 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan10g0543 zf-B_box 1.5e-08 No_clan