Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0540 ATGGATGGAAAAGATAAGAGGATTAGGGCGAAGAATAAGAGATCGAAGGCGGTGGAAATTGGTTTTGATTTGGATGATAATGAAACCATTGGCTCTATGTTTAAGCTAAAGAGGCTGAAGAAGAAGGTTAATTTGGCGCCGGAGGGGTCTTGTGGTGATGTAGGCAAGAGTGGTGAGGTTGTTGAGAAAGATTCAGTTGCTGCAAAAAAGGATTTCGGAGATATGGATGATACCTTGGCTAGTTTCAGGAGGAGGTTGAAGGATCTAAAGAGGAATCGGGGATCTGAAGCCAGTGGAGGAAGAAGTTATGCTTTGAATGTAGGGCTGGAGTCTTCTGATAGATCTCTGAATGTTTCTGTTGAGGGAATTGAGGGTCATGGTTTGCCTGGTGATGATTTCGTTGCTCAGGAATCAAGGGGCACCATTAATAATGAGAAAGGGGGATGTTTGTTGCGTGGTGATGGCCTGGAGCACTCTTATGATGAAAATATGGAAGACTCCTTGTCAGTGATTGTCCGAAAGGCACAATCTAATTTGATTAAGAAATCACGGACCTCTTCAAGTTCAAAGAAAAAAAAAGGGATTGAGAATGTGGATAATGACCTGAGACCTGGCTCTGAAAGTGTTCCTGAAACTGTAGATTCTGTGGCTGAATTTAGATCTAGACCTGCTTCTGCCTTGGGATCGGTGAGGAAAGATCTGACATGTTCCGGTTCTGTGTCACAATCATCTGCTCCGGGTCAATTTTCTTCCATGTCTGTAATTGATAGACAAAAGTATGACTGTTTTCAAGAGGGTATTGCTGAGGGCATTTGCAATTCAAACATTCCAGGTGAACCATTAGTTGATCACTGTCTCTCAACTAACGTCGGCAAAGGGGATAGACAACTCTTAAATCGGTGTTCTTCCAGGTTAGATGGTGTTGAAATAATTGATACCGTGCTTCTTTCAAAATTTGGGGAGGTGGTACATGAATGTACTGAGAGTGAGTTCAAGGATAGATCGACTGATGAGCTATCACAAATGTGTGATGATGCTTCAAAACATGGTGTTTCTATTTCTATTGAGAAAGAAAGTTCCTTACCTTCTCATGACATTGAGCCCTTGATTAAATCGGCTGAAAATATATTGAGTGAGAACAATTTTACGGTTTCTGGAAACTTTTTCCAGGAATCATCAGGCAATGAAGCTCTAAAGCTTTCTGGATCCCATGTGGAGGAGGATGGAGGTGTAAAATCTGAAACTGAGTTTATTTCTGGTAGAAATTTCTGTGATTATAGTAGTTTAGATACAAAGGCTGAAGTGAAAGATTATATTTTAGGTTCTTCAATTGAAAAAAATGATGTAATGGCTGGTGGCAGTTTATCTCCTATGATGTCTAATGAAGCCAATGAATATGAATTGGCTAATGAGTCAAATCACCAAGAGAAACCTTCAGAAATATGTAATATTCCAAAAGACTCTACTGTTTCAGTTTTGGAATGCTTAGATCCAGTTCAATCCGATGGATCCTCCCCTCCATCTGCAATTCCAGATGAAAATGAGAATTATGCAGAATGCCATGCCTCTCTGTCTGATTTTGTCAACAATGATGGTAAGATATCAGCTGTTCCACGTGCGGTGCGAAAGGCCAAAATGCTTAAGCATGGAGACATGACTTATGAGGGGGATGCTGATTGGGAGATTTTAATAAATGATCAATCTCTTCACAGAAGCCAAGTTGTTATAGATGATGACCACACTCTTAGAGCAAGGGAGAAGCTTGATTCCTCTTTTAATGTTACCGATGACTCTGAAAGTGTTGCAGTAGTAGCTGTATCAGCTGGACTCAAAGCCCATGCAGCTAGTCCAATTGAGAAAATAAAATTTAAGGAGATCTTGAAGCGTAAAGGTGGTCTCAAGGAATACTTGGATTGCAGAAATAAGATCTTAAGTATTTGGAGCAGAGATATTACACGCATTTTGCCTCTTGCTGAATGTGGAGTTAGTGATATCCATTCTGACGATGAAGGTCCTCGTTCTTTTCTTATCAGGGAAGTCTACGCATTTCTGGATCAATGTGGTTACATAAATGTTGGAATCTCCTCTCAAGAGGAGATTCTTGGAAATAGTGCAAGTAATTGCTGTAAACTTGTAAAAGAAAAAGGTTTTGAGGAAAGTTCGACAGCTTCGGTGGCTGACTCTGAAGATGGAGTTTCCTTTATTGTTGGTCAGACTAAAATGTCAGATACTTCCGTGGAGATTAACAATGGTCTAACAGTGGATTACAAAGACCTGAAAACAGAAGCTGCAGAAGACAGAAGGCTTTTCAATGCAGCAATGATGAGTATATCAAATATGAGACAACATGAAGAAGGAAAATATTATGACTACCAGGAAAATGCTACAGGGCAAAGCAATGAATCCACCTGTGTTAAATCCACATTAGGTGATCAGATAGATGATCTTCTGCAGTCTGATTCAGAGGCTAGAAAGAGAGTGATTGTGATTGGAGCTGGTCCTGCTGGGCTAACTGCTGCCCGTCATTTGAAACGTCAGGGATTTCCTGTAACTGTACTTGAGGCTAGGAGTAGGATAGGAGGTCGAGTATTTACAGATCACTCATCTCTTTCTGTCCCTGTGGATCTCGGTGCTAGCATTATCACTGGTGTTGAGGCTGATGTGGCCACTGAGAGAAGACCAGATCCTTCTGCATTGGTTTGTGCTCAATTGGGCCTTGAATTGACAGTGCTAAACAGTGATTGCCCTCTTTACGACACAGTGTCAGGACAAAAGGTTCCACCAGATATGGATGAAGCACTGGAAGCTGAATACAATATTCTTCTTGATGACATGGAATTGCTCGTTGCTCAGAAAGGTGAACAAGCAATGAGAATGTCTCTTGAAGATGGTTTAGAATATGCCCTTAAGATTCGCCGTATGGCACACTCTGGAAGTATTGAAGAAAATGAAAAAGATAATTCTGGTTGTAGTCCATTTGATTCTAGAAGAGACTGTACTGTGAAGAAAAAAACTGACAAGGAGATTTTGAGTCCTCTGGAGAGGAGGATTATGGATTGGCACTTTGCTCATTTGGAGTATGGTTGTGCTGCTTTGCTTACAGAAGTTTCTCTTCCCTATTGGAATCAAGATGATGTCTATGGAGGATTTGGGGGAGCTCATTGTATGGTTAAAGGGGGTTACAGCACTGTTGTTGAGTCTTTGGGAGAAGGGCTTCCTGTCCACTTGAACCATGTCGTAACAAATGTGTCTTATGGCATCAAGGAATCTGGCCAGAATAATAAAGTCAAAGTTTCTACGTCAAATGGGAACGACTTCTTTGGAGATGCTGTCCTCATCACTGTTCCACTAGGCTGTTTGAAGGCTGAAACTATACAATTCTCCCCTCCTTTGCCGCCATGGAAATATTCTTCTGTTCAGCGTCTTGGCTTTGGAGTTCTCAATAAAGTGATCTTGGAATTTCCTTGTGTGTTTTGGGATGATGCTGTGGATTACTTTGGAGCGACAGCTGAGGAAAGAGGCAAAAGAGGTCACTGCTTTATGTTCTGGAATGTCAGGAAAACAGTTGGGGCTCCTGTCCTTATAGCATTAGTGGTTGGTAAGGCAGCCATAGATGGTCAGAGTTTGAGCTCTACTGATCATGTCAACCATGCATTGAAAGTTCTCCGTAAACTTTTTGGGGAGGCTTCAGTACCTGATCCTGTTGGACATGTCGTGACTGATTGGGGTAGGGATCCTTTTAGCTATGGTGCTTATTCTTATGTTGCTATTGGAGCATCAGGAGAAGACTACGATATATTAGGGAGGCCAGTTGATAATCACTTGTTTTTTGCTGGTGAAGCGACCTGCAAAGAACATCCTGATACAGTTGGTGGTGCAATGATGAGTGGACTACGGGAGGCTGTTCGCATAATTGACATATTTAGCACTGGAAATGATTACACTGCAGAAGTGGAGGCAATGGAAGCTGCCTCGAGACAGTTAGATACCGAAAATGAAGTTGGGGATATAACAAAGAGACTCAACACAATAGAGCTTTCTAACCTATTCTACAAGAACTCTTTGGATGGTGCTCAAATCTTAACCCGGGAAGCTTTACTAAGAGAAATGTTCCTTAATGCGAAAACCAATGCTGGGCGCTTGCATGTGGCCAAAGAATTGCTATGCCTTCCTGTTGGAAACTTGAAGTCCTTTGCTGGGAGTAAAGACGGGCTAGCTGTTCTCAACTCATGGATACTGGACTCAATGGGGAAGGATGGTACCCAACTCTTGCGGCACTGTGTGCGACTTCTTGTGCGTGTTTCAACTGATCTGCTTGCTGTACGCTTGTCAGGAATAGGGAAAACAGTGAAGGAAAAAGTTTGTGTGCATACCAGCCGCGACATTCGTGCTATAGCAAGCCAGTTGGTCACTGTATGGCTTGAAGTATTCCGCAAGGAGAAAAAAGCTTCTAATGGGGGATTGAAGTTGTCAAGACAAGCAACTGCTGTAGATTTACTAAAGAGAAAATATTTAAAAGATTCAGCCTCAGGAAAGCCACCCCTGAGTACACATCATGGTAGCTTTGAGAATAAAGGAACACAACATGCAACCATTGTTTCAAGGCATGAGGCCAATTCTTCCAGGTCCCAAGGTTCAATTGGCAAAGTACTCATCGAGACGGAGGATAACTGCTATGTTATTTCTGAAGAAGAACGGGCTGCGATAGCTGCTGCAGAAGCTGCCCGTGCTAAAGCTCATGCTGCTGCTGAGGCATATGCTGCTGCAGAAGCCAGGCGCAGTAAGTTGTTACAGCTTCCTAAGATACCCTCATTCCAGAAATTTGCTTCAAAAAATGATGAATTTGATAGCAGAAAAAAGTGGTCTGGTGCTTTGGGAAGGCAAGATTGTATTTCAGAGATTGATTCGAGGAATTGTAGAGTTAGGGACTGGTCTGTTGATTTTTCTGCTGCTTGTGTTAACCTTGACAATTCTAGAATGCCCGTTGATAACCTTTCACAGAGGAGTCACTCAAATGAGATTGCCAGTCATTTGAGTTTCAGAGAGCACTCGGGAGAAAGTGTCGCTGTGGACAGCAGTATATATACAAAAGCTTGGATTGACACAGGTAGTGGTGTGGGAATAAAAGATTCTGATGCCATAGATAGATGGCAATCTCAAGCAGCTGCAGCTGATTCTTATTTTTCAAATCCAAGCATAAATTTGAAGGATGAGGAAGATTCAAATGTCTGTTCAAGGTTACCCATCTGGAAGCATGATGGTATGGCAAATGAGAGTTCTATTTCACAGGTTACTGTAAATATGGAAGCCTTGAAAAGTCATTCCCGTGGAACAGATCATATCAAACAGGCTGTTGTGGATTATGTTGGTTCACTACTTATGCCCCTTTATAAAGCAAGGAAACTAGACAAGGATGGCTACAAGGCTATAATGAAGAAAAGTGCAACGAAGGTCATGGAGAAAGCCACAGATAAAGAAAAAGCTATGACTGTTGACGAGTTTCTAGATTTTAAGCGAAAGACTAAGATTCGCTCCTTTGTGGACACATTGATTGAGAGACACATGGCAATGAAACCAGATATGAAGTCTTAA 5592 0.4188 MDGKDKRIRAKNKRSKAVEIGFDLDDNETIGSMFKLKRLKKKVNLAPEGSCGDVGKSGEVVEKDSVAAKKDFGDMDDTLASFRRRLKDLKRNRGSEASGGRSYALNVGLESSDRSLNVSVEGIEGHGLPGDDFVAQESRGTINNEKGGCLLRGDGLEHSYDENMEDSLSVIVRKAQSNLIKKSRTSSSSKKKKGIENVDNDLRPGSESVPETVDSVAEFRSRPASALGSVRKDLTCSGSVSQSSAPGQFSSMSVIDRQKYDCFQEGIAEGICNSNIPGEPLVDHCLSTNVGKGDRQLLNRCSSRLDGVEIIDTVLLSKFGEVVHECTESEFKDRSTDELSQMCDDASKHGVSISIEKESSLPSHDIEPLIKSAENILSENNFTVSGNFFQESSGNEALKLSGSHVEEDGGVKSETEFISGRNFCDYSSLDTKAEVKDYILGSSIEKNDVMAGGSLSPMMSNEANEYELANESNHQEKPSEICNIPKDSTVSVLECLDPVQSDGSSPPSAIPDENENYAECHASLSDFVNNDGKISAVPRAVRKAKMLKHGDMTYEGDADWEILINDQSLHRSQVVIDDDHTLRAREKLDSSFNVTDDSESVAVVAVSAGLKAHAASPIEKIKFKEILKRKGGLKEYLDCRNKILSIWSRDITRILPLAECGVSDIHSDDEGPRSFLIREVYAFLDQCGYINVGISSQEEILGNSASNCCKLVKEKGFEESSTASVADSEDGVSFIVGQTKMSDTSVEINNGLTVDYKDLKTEAAEDRRLFNAAMMSISNMRQHEEGKYYDYQENATGQSNESTCVKSTLGDQIDDLLQSDSEARKRVIVIGAGPAGLTAARHLKRQGFPVTVLEARSRIGGRVFTDHSSLSVPVDLGASIITGVEADVATERRPDPSALVCAQLGLELTVLNSDCPLYDTVSGQKVPPDMDEALEAEYNILLDDMELLVAQKGEQAMRMSLEDGLEYALKIRRMAHSGSIEENEKDNSGCSPFDSRRDCTVKKKTDKEILSPLERRIMDWHFAHLEYGCAALLTEVSLPYWNQDDVYGGFGGAHCMVKGGYSTVVESLGEGLPVHLNHVVTNVSYGIKESGQNNKVKVSTSNGNDFFGDAVLITVPLGCLKAETIQFSPPLPPWKYSSVQRLGFGVLNKVILEFPCVFWDDAVDYFGATAEERGKRGHCFMFWNVRKTVGAPVLIALVVGKAAIDGQSLSSTDHVNHALKVLRKLFGEASVPDPVGHVVTDWGRDPFSYGAYSYVAIGASGEDYDILGRPVDNHLFFAGEATCKEHPDTVGGAMMSGLREAVRIIDIFSTGNDYTAEVEAMEAASRQLDTENEVGDITKRLNTIELSNLFYKNSLDGAQILTREALLREMFLNAKTNAGRLHVAKELLCLPVGNLKSFAGSKDGLAVLNSWILDSMGKDGTQLLRHCVRLLVRVSTDLLAVRLSGIGKTVKEKVCVHTSRDIRAIASQLVTVWLEVFRKEKKASNGGLKLSRQATAVDLLKRKYLKDSASGKPPLSTHHGSFENKGTQHATIVSRHEANSSRSQGSIGKVLIETEDNCYVISEEERAAIAAAEAARAKAHAAAEAYAAAEARRSKLLQLPKIPSFQKFASKNDEFDSRKKWSGALGRQDCISEIDSRNCRVRDWSVDFSAACVNLDNSRMPVDNLSQRSHSNEIASHLSFREHSGESVAVDSSIYTKAWIDTGSGVGIKDSDAIDRWQSQAAAADSYFSNPSINLKDEEDSNVCSRLPIWKHDGMANESSISQVTVNMEALKSHSRGTDHIKQAVVDYVGSLLMPLYKARKLDKDGYKAIMKKSATKVMEKATDKEKAMTVDEFLDFKRKTKIRSFVDTLIERHMAMKPDMKS* 1864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0540 1863 MobiDBLite consensus disorder prediction 181 214 - -
Lan10g0540 1863 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 1402 1486 IPR035441 -
Lan10g0540 1863 Gene3D - 932 1260 - -
Lan10g0540 1863 ProSiteProfiles SWIRM domain profile. 601 701 IPR007526 GO:0005515
Lan10g0540 1863 MobiDBLite consensus disorder prediction 1507 1545 - -
Lan10g0540 1863 SUPERFAMILY FAD/NAD(P)-binding domain 824 1306 IPR036188 -
Lan10g0540 1863 Pfam SWIRM domain 612 691 IPR007526 GO:0005515
Lan10g0540 1863 MobiDBLite consensus disorder prediction 1514 1545 - -
Lan10g0540 1863 SUPERFAMILY Homeodomain-like 599 696 IPR009057 -
Lan10g0540 1863 Coils Coil 1572 1592 - -
Lan10g0540 1863 Gene3D - 827 1303 IPR036188 -
Lan10g0540 1863 PRINTS Adrenodoxin reductase family signature 826 848 - -
Lan10g0540 1863 PRINTS Adrenodoxin reductase family signature 849 862 - -
Lan10g0540 1863 Gene3D - 600 702 IPR036388 -
Lan10g0540 1863 Pfam Flavin containing amine oxidoreductase 835 1305 IPR002937 GO:0016491
Lan10g0540 1863 PANTHER LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 531 1859 - -
Lan10g0540 1863 PANTHER FLAVIN MONOAMINE OXIDASE 531 1859 - -
Lan10g0540 1863 SUPERFAMILY FAD-linked reductases, C-terminal domain 1143 1254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0540 Lan-Chr10 4378084 4388894 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI or SNF-SWI3 Lan10g0540 Amino_oxidase 1.3e-104 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0540 10 4378084 4388894 Lan3g0454 3 4095816 4105503 LSH