Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0539 ATGACTACTTCCCTTCTTCTTCTTCCAATTCTTCTTGCTATATTAACATTGTCACTACCGATGTTAGCGCTAGCTGACAACGGTAGCTGGCAGCTTCTACAGAAGAGCATAGGAATAGTCGCCATGCACATGCAACTACTACACAATGACCGTGTTGTTATTTACGACCGAACCGATTTTGGGCTCTCTAATTTATCTTTACCCAATGGAAGGTGTCGCCAAAACGATAAAGAGCTTGCTGTGAAAACGGACTGCACCGCTCACTCCGTTGAATACGACGTCACATCGAATAGGTTCCGAGCATTGTTTATCCAAACCAATGTTTGGTGCTCCTCCGGTTCAGTTTCACCTAATGGGACTTTGGTTCAGACCGGTGGTTTCAATGATGGAGAACGTAAAGTTAGGACTTATAGTCCTTGTTCTACATGTGACTGGCAAGAACTTGAAAATGGACTCGTTGCACGAAGATGGTACGCCACCAATCACAAGCTACCGGACGGTGGTCAAATAATAATCGGCGGAAGAAGACAATTCAACTACGAGTTTTACCCCAAAACTGAAGCCACAGCCAAAAACACTTATAGTTTACCCTTTTTGGTTCAAACAAGTGAACCTAGAACAGAAAACAACCTATACCCTTTTGTTTTCTTAAACGTGGATGGCAATCTTTTCATCTTCGCAAACAACAAAGCAATCTTATTCAACTATACTAACAATGTTGTCGTCAAAACATTCCCTCAGATTCCAGGTGGTGATCCTAGGTCTTATCCAAGTTCTGGTTCAGCTGTGTTATTACCATTAAGGAATTTGCAAGGTGCAATTTTGGAAGCTGAGGTTTTGGTTTGTGGTGGAGCTCCAAAAGGATCTTATGAACAAGCCTCAAAGGGTCATTTTATTGGAGCGTTGAATACTTGTGCTAGGGTTAAAGTAACTGATCAGAACCCAAATTGGGTTATGGAGACTATGCCGGGTGGTAGAGTTATGAGTGATATGGTGATGCTTCCTAATGGTAATGTTTTAATTGTTAATGGTGCAGGTTCAGGTACAGCTGGATGGACATTCGGGCGGAACCCGACTTTAAACCCGATTATTTATAAAACAAATAGTCCACTGGGGTCACGGTTTGAGTTGCAAAACCCATCTAGCATCCCTAGAATGTACCACTCTACAGCTGTTTTGGTTCGTGATGGAAGGGTACTAGTTGCTGGAAGCAATCCCAACGTCTATTACAATTTCACTAACGTGATATTTCCAACAGAGCTAAGTGTGGAAGCCTTTTCTCCTTCATATTTAGAACCTGGCTTTGACAATTTGCGACCAAGAATTATGTCTCCTACTTCACAATCTCAAATTATGTATGGTCAGATATTGGAGGTTCAGTTTCAGGTGAAAGGAACATTGTCTCAAAATTTAGTGTTGGTGACTATGTTATCGCCACCTTTTACCACACACTCTTATTCAATGAATCAAAGGTTGTTGGTGTTAGAGCCAAAGAGTGTGACAAATGTGAATGGAACACTGTACCAAGTTGTAGTCACCACACCTGGTTCACCTATTCTTGCACCACCTGGTTTTTATCTACTATTTGTGGTACACCAAGACATTCCTAGCGAGGGTATTTGGGTACATATACATTGA 1638 0.417 MTTSLLLLPILLAILTLSLPMLALADNGSWQLLQKSIGIVAMHMQLLHNDRVVIYDRTDFGLSNLSLPNGRCRQNDKELAVKTDCTAHSVEYDVTSNRFRALFIQTNVWCSSGSVSPNGTLVQTGGFNDGERKVRTYSPCSTCDWQELENGLVARRWYATNHKLPDGGQIIIGGRRQFNYEFYPKTEATAKNTYSLPFLVQTSEPRTENNLYPFVFLNVDGNLFIFANNKAILFNYTNNVVVKTFPQIPGGDPRSYPSSGSAVLLPLRNLQGAILEAEVLVCGGAPKGSYEQASKGHFIGALNTCARVKVTDQNPNWVMETMPGGRVMSDMVMLPNGNVLIVNGAGSGTAGWTFGRNPTLNPIIYKTNSPLGSRFELQNPSSIPRMYHSTAVLVRDGRVLVAGSNPNVYYNFTNVIFPTELSVEAFSPSYLEPGFDNLRPRIMSPTSQSQIMYGQILEVQFQVKGTLSQNLVLVTMLSPPFTTHSYSMNQRLLVLEPKSVTNVNGTLYQVVVTTPGSPILAPPGFYLLFVVHQDIPSEGIWVHIH* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0539 545 Pfam Glyoxal oxidase N-terminus 42 284 IPR009880 -
Lan10g0539 545 CDD E_set_GO_C 434 544 IPR015202 -
Lan10g0539 545 Gene3D Immunoglobulins 438 545 IPR013783 -
Lan10g0539 545 Pfam Galactose oxidase-like, Early set domain 439 544 IPR015202 -
Lan10g0539 545 PANTHER OXIDASE, PUTATIVE, EXPRESSED-RELATED 18 544 - -
Lan10g0539 545 PANTHER SECRETED PROTEIN-RELATED 18 544 - -
Lan10g0539 545 Gene3D - 24 434 IPR037293 -
Lan10g0539 545 SUPERFAMILY E set domains 435 544 IPR014756 -
Lan10g0539 545 SUPERFAMILY Galactose oxidase, central domain 90 432 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0539 Lan-Chr10 4365241 4368582 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1204 15 20503455 20505395 Lan10g0539 10 4365241 4368582 PCT
Lan14g0941 14 15829588 15831323 Lan10g0539 10 4365241 4368582 PCT