Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0537 ATGGAAGGTGATCAAAAAACTAGTTTTGGGACACCCTCAGGAGCAGTTTCTAGACCAACAAACCGTTTTAATGCTCTCAATCAAATGGGTATTCCACCATCTCACCCGAATACTAATATTTCGCCTTCGAGTTCAAACCCTTATTCCCAATTTATGGCCTCACAACCCCAGAGATTGCGTTCTCCGAATCCGAGCCACGGGACAGGGTCATCATCCCATTCTAGGTCTTTGTCTCAACCCTCATTTTTCTCTTTGGATTCCTTGCCCCCTTTGAGTCCTTCGCCTTATCAAACATCAAGTGCTGGCACTACATTTGTTGAATCGCTTGCAGCAAGTGTGTCTATGGAGGAAAGCTTGGGTAATGCGCCTTCTGTGCCTGTTAACCGCGGCCATCCTATTCAGCTTGGTCATAGTCTTCCTCCTCGTAAGGGACACAGGCGTTCGAGCAGTGATTCTCCTTTAGGAATCTCTGATTATATTCAGTCCATTCCTCAGTTTGTTTCATCTGGTGTTTGGAATGATGATGACAATTTGGTTTCAAGAGGAGAAAGCTCGGGTTTTGAGAAGGAGAAGAAACCGGTCCAGTTAGTCTTAAAGGTGCCGAACAAGGATGTGGGCTGTATTGATGGCTTTAGTGGAGAAATAGGGAATGCAAGGAAAGAGGATTCACTGGATGATTTATTTAGTGCGTACATGAATTTGGACAACATTAATAATATCGGGTTTTCAATGGAAGATAAGGATATGGATAGCAAAACAAGTGGTTCCAAGACAGTTGAAAGCAGTGACAATGAAGTTGAGAGTCGTGCTAAGGGGAAAACCACCGGTGCTCGGGGGGCCAGTTCAAGCTGTTCTGAAGAACGAAAGGAAGGAGTGAAGAGGAGTTTGAATGGAGATATTGCACCTGGTGCCCGGCACAGGAGAAGTTTTTCATTGGATAGTTCCATTGGAAATTTTCGTATTGAAGATGGATCACCTAAGCTTCCTCCTTTGCAAAATCAAGTTGGTCAACATTCGCCTAGCAATTCAATAGACGGTAAAACATCTGAAACCAGCATGGAGTTTGGAAACAGCGAGTTCAGCTCCGAGGAGCTAAAGAAAATAATGGAAAATGATAAGCTTGCTGAAATTGCCATGTCTGATCCCAAGCGCGCAAAAAGGATTTTGGCTAATCGTCTATCAGCTGCACGTTCAAAAGAGCGGAAGACACGATACATTTCTGAATTGGAGCACAAAGTGCAAACTCTTCAGGCAGAGACAACTACATTGTCTACCAAGTTTACCAAATTACAGATGGATACTGCAGAGCTTAAAAGTCAGAATAATGAGTACAAATTGAGGCTTCATGCCATGGAACAACAGTCTCAACTGAAAGATGCTCTGAACGAGACTTTGGATGCTGAAGTCCGCCGTTTAAGGCGCACTGTCGCAGAACTTGGTGGGGAGTCCCTCCTCTCAAGTCGCATGGCTCAACAACTTGCTATTAACCAACAAATGTTCCAGTTACAGCAGCAACAGCAGGCCAGTCAGGTTAGACAATTTCAACAGCAGAACAACCATCCTCATCAAGAGACACAATCTCCGTCGCAGCCACAGCAGATTCAGCACAATACTGAATTACAATCCCAGAGACAGAATGGCAAAGCTACCGCTTACTGA 1659 0.4448 MEGDQKTSFGTPSGAVSRPTNRFNALNQMGIPPSHPNTNISPSSSNPYSQFMASQPQRLRSPNPSHGTGSSSHSRSLSQPSFFSLDSLPPLSPSPYQTSSAGTTFVESLAASVSMEESLGNAPSVPVNRGHPIQLGHSLPPRKGHRRSSSDSPLGISDYIQSIPQFVSSGVWNDDDNLVSRGESSGFEKEKKPVQLVLKVPNKDVGCIDGFSGEIGNARKEDSLDDLFSAYMNLDNINNIGFSMEDKDMDSKTSGSKTVESSDNEVESRAKGKTTGARGASSSCSEERKEGVKRSLNGDIAPGARHRRSFSLDSSIGNFRIEDGSPKLPPLQNQVGQHSPSNSIDGKTSETSMEFGNSEFSSEELKKIMENDKLAEIAMSDPKRAKRILANRLSAARSKERKTRYISELEHKVQTLQAETTTLSTKFTKLQMDTAELKSQNNEYKLRLHAMEQQSQLKDALNETLDAEVRRLRRTVAELGGESLLSSRMAQQLAINQQMFQLQQQQQASQVRQFQQQNNHPHQETQSPSQPQQIQHNTELQSQRQNGKATAY* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0537 552 MobiDBLite consensus disorder prediction 330 359 - -
Lan10g0537 552 MobiDBLite consensus disorder prediction 1 101 - -
Lan10g0537 552 Coils Coil 434 454 - -
Lan10g0537 552 Coils Coil 462 482 - -
Lan10g0537 552 MobiDBLite consensus disorder prediction 245 359 - -
Lan10g0537 552 SMART brlzneu 379 443 IPR004827 GO:0003700|GO:0006355
Lan10g0537 552 Pfam bZIP transcription factor 383 441 IPR004827 GO:0003700|GO:0006355
Lan10g0537 552 Gene3D - 382 435 - -
Lan10g0537 552 PANTHER BZIP TRANSCRIPTION FACTOR 55 552 - -
Lan10g0537 552 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 55 552 - -
Lan10g0537 552 CDD bZIP_plant_RF2 384 435 IPR044759 GO:0003700|GO:0006355
Lan10g0537 552 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 381 444 IPR004827 GO:0003700|GO:0006355
Lan10g0537 552 MobiDBLite consensus disorder prediction 510 552 - -
Lan10g0537 552 MobiDBLite consensus disorder prediction 120 155 - -
Lan10g0537 552 SUPERFAMILY Leucine zipper domain 383 439 IPR046347 GO:0003700|GO:0006355
Lan10g0537 552 Coils Coil 399 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0537 Lan-Chr10 4352914 4356469 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan10g0537 bZIP_1 9.7e-12 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0537 10 4352914 4356469 Lan5g0443 5 9690934 9696030 LSH
Lan10g0537 10 4352914 4356469 Lan3g0453 3 4083625 4087735 LSH