Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0532 ATGGACCGACGGTGGCCGTGGAAGAAGAAATCGTCAAGTGATAAGGGTGTGCTTGATAAAGTTGCTGCTGAATTGGACTCTGCGACTGTTTCTTCCACTCAGAGCAATCATCAGGAAACTTATAAGAAGCCTAACTATGTCAAAATCTCTGTGGAAACGTATACACATTTGGCTGGTTTGGAGGATCAGGTTCAGACATATGAAGAAAAAGTTCAGGAACTGGAGGATGAGATCACAGAATTGAATGAAAAACTGTCTGCAGCAAACTTGGAGATAAATACAAAAGAAACCTTGGTAAAACAACATGCCAAAGTAGCTGAAGAGGCTGTCTCAGGATGGGAGAAGGCTGAAGCAGAAGCTTTGTCATTGAAGAACCATCTCGAATCTGTCACTCTCTCAAAACTCACCGCTGAGGACCATGCAGCGCAGTTGGATGGTGCTCTTAAAGAATGTATGCGTCAGATAAGAAACTTGAAGGAAGAACATGAGCACAAAATACAGGAAGTTGCTCTGGCAAAAACCAAGCAGCTAGACAAGATTAAGGGTGAGCTTGAGTTAAGGATAGGTAACTTTGAACAGGAGCTCCTCAGGTCTGCTGCTGAAAATGCTGCGCTGTCAAGATCCTTGCAGGAGCGATCCAACATGCTGATGAGAGTGAATGAAGAAAAAGCTCATGCTGAGTCTGAAATTGAGCATCTTAAGAGCAACATAGAATCATGTGAAAGAGAAATCAATTCACTTAAATATGAGCTTCATCTTATTTCCAAAGAGCTGGAGATTCGCAATGAAGAAAAGAACATGAGTATGAGGTCTGCAGAAGCTGCTAACAAGCAACATGTGGAGGGTGTTAAAAAAATTGCTAAATTAGAAGCAGAGTGCCAACGGTTACGTGGTCTAGTACGGAAAAAGCTACCTGGTCCTGCTGCACTTGCACAAATGAAGTTAGAAGTTGAAAATCTTGGCCGAGAATATGGAGATACTCGATTCAGGAAGTCTCCTGTCAAACCTGCTAGTCCTCATCTGTCCCCATTCCCCGAGTTCTCCCTTGAGAATGTACAGAAATTCCAGAAGGATAACGAATTTCTTACAGAGCGTTTATATGCAGTGGAAGAAGAAACAAAGATGCTAAAAGAAGCTTTGGCAAAACGTAACAGTGAACTGCAGGCCTCAAGGAGTATGTGTGCTAAAACACTAAGCAAGCTTCAAATTTTGGAAGCACAAGTGTCAAGTAATCAGCAGAAGGGATCTCCAAAAGCCATGCATATAACCCACGAAAGCATTCACAGTCAAAATGCAAGCTATGTGCCAAGCATAATGTCCATGCCTGAAGATGGAAATGATGATGCGGTTAGTTGTGCTGAGTCTTGGTCTACAGCAGTAATGTCTGACCTATCCAAATTCCCAAAAGAAAAGAGTGTTGAAGAACCGAGTAAATCTGAAGCCACTAAGAAGTTGGAACTAATGGATGACTTTCTGGAGGTGGAGAAGTTGGCTCGTTTATCAAATGACTCTGATGGAGATGCATCTGTTTCAGTTTCGTCAAACAATAAGACGACTGAAATTGAGACTGGCGATGTATCAGAAGTCAGTACTGGCAAAGATGATCCCTCCGAAAAGAAGAGTGATTTAAATCCATTGCCAAGTCAGGTGTCTTCTGGGTTAGAATTGTCTGCAACTTATCATCAATCTGATGTTGATGGCTCATCTGTATCTGTGCTTCGATCAAAAATATTAGCAGTTTTTGAGTCTATGGCAAAGGATGCTGATATAGGGATGATCCTGGAGGATGTTAAACATGTTCTTGAAGATGCACATAACAGTTCCATGAAACACTCTGTAGCAGTCATTCCCCAGGATATCAAGTCTTCTGATACTACATGTGATAAGCAAGATAATCTTGATGGTACTGATTTAAATGCTGAAGATGAACTCATTTCATCCCAACAATCAGCAGAACATGTGCAGTTAACTTCAGATTTAGAAGTTGCAGTTTCTCAGATTCACAACTTTGTATGCTTCCTTGGCAGGGAAGCAATGGCAGTTCATGACGTAACTTCTAGTGGAGATGGAATAAGCCAAAAAATTGAGGAGTTCTCTGTCACCTTTGATAAAGTTATATCTAATGAAGCAAGCTTGTTACAGTTTGTTCTTGACTTGTCAATTGTTTTAGCTAACGCAAATGAGTTCAGATTTAATATCCTTGGTTACAAGGGTACAGAAGCTGAAAATAATAGCCCTGATTGCATAGACAAGATTGCTTTGCCTGAAAATAAGTTAGTTCATGACAGTTTACCTGGAGAAAGATATCAAAATGGTCACTCCCATATTATTAATCCCTGTTCTGATCCTGAGATTCCTGATGATGGAAATTTGATATCAGGCTATGAATCAAATGCTACTTCACGAAAGATCCGAGTAGAGGAGTTCGAAGAGTTAAAATTAGAGAAAGAGAAGGCAGTAGAGGATCTGTTAAAATGTGTTGAAAATCTTGAAATGACAAAGTCTGAGTTACAAGTGACTGAGCAGCTTCTAGCTGAAGTTAAATCCCAATTGGCTTCTGCTCAAAGATCAAACAGCTTGGCTGAGACACAACTAAAATGTATGGCAGAGTCCTACAGGTCACTGGAAACACGTGCACAGGAGTTTGAGGCTGAACTTAATCATCTACGAGTGAAGACTGAAACTCTGGAGAATGAACTGACAAATGAAAAGAAGGCTCATGAAGCCACTTTGACCAAGTACATGGAGCTAGAAGATCAAATGCAAAGGTATGAGAGCTCAGCTGCAGATAATGACCATAAGACTAAGCAGGAGAGAGATGTAGCAGCTGCAGCCGAAAAGCTAGCCGAGTGTCAGGAAACCATATATCTTCTTGGCAAGCAGTTGAAAGCTCTGCATCCTCAAACAGAGCCAACGGGATCTCTGTACAGTGAGAAAGATCCAAAGGTTGAAGGCTTCACAGAGCATGAACCTACTGCTAATAGCCCAAATTTTCAAGAGTTTGGTCAAGTGGAGATGGACAATGCCGCTTCTGCTTTTGTGCAAAGACCAGGTGCAGAGTCCCCCTTGCATTTTACTAACGCTTTATACAGCCCCGATAACGAGCCAAACTTTCCAGCCATATCTCCAGTACAGCATCCACATCACAGGTCTACCATTTCAATCTCTTCATCAGCTTCTTCCACTCCAACACCAGAGAAACATTCCCGAGGTTTTACTAGATTCTTTTCATCAAAAGCAAAAGCTGGTAATTAA 3255 0.4141 MDRRWPWKKKSSSDKGVLDKVAAELDSATVSSTQSNHQETYKKPNYVKISVETYTHLAGLEDQVQTYEEKVQELEDEITELNEKLSAANLEINTKETLVKQHAKVAEEAVSGWEKAEAEALSLKNHLESVTLSKLTAEDHAAQLDGALKECMRQIRNLKEEHEHKIQEVALAKTKQLDKIKGELELRIGNFEQELLRSAAENAALSRSLQERSNMLMRVNEEKAHAESEIEHLKSNIESCEREINSLKYELHLISKELEIRNEEKNMSMRSAEAANKQHVEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVENLGREYGDTRFRKSPVKPASPHLSPFPEFSLENVQKFQKDNEFLTERLYAVEEETKMLKEALAKRNSELQASRSMCAKTLSKLQILEAQVSSNQQKGSPKAMHITHESIHSQNASYVPSIMSMPEDGNDDAVSCAESWSTAVMSDLSKFPKEKSVEEPSKSEATKKLELMDDFLEVEKLARLSNDSDGDASVSVSSNNKTTEIETGDVSEVSTGKDDPSEKKSDLNPLPSQVSSGLELSATYHQSDVDGSSVSVLRSKILAVFESMAKDADIGMILEDVKHVLEDAHNSSMKHSVAVIPQDIKSSDTTCDKQDNLDGTDLNAEDELISSQQSAEHVQLTSDLEVAVSQIHNFVCFLGREAMAVHDVTSSGDGISQKIEEFSVTFDKVISNEASLLQFVLDLSIVLANANEFRFNILGYKGTEAENNSPDCIDKIALPENKLVHDSLPGERYQNGHSHIINPCSDPEIPDDGNLISGYESNATSRKIRVEEFEELKLEKEKAVEDLLKCVENLEMTKSELQVTEQLLAEVKSQLASAQRSNSLAETQLKCMAESYRSLETRAQEFEAELNHLRVKTETLENELTNEKKAHEATLTKYMELEDQMQRYESSAADNDHKTKQERDVAAAAEKLAECQETIYLLGKQLKALHPQTEPTGSLYSEKDPKVEGFTEHEPTANSPNFQEFGQVEMDNAASAFVQRPGAESPLHFTNALYSPDNEPNFPAISPVQHPHHRSTISISSSASSTPTPEKHSRGFTRFFSSKAKAGN* 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0532 1084 Coils Coil 934 954 - -
Lan10g0532 1084 MobiDBLite consensus disorder prediction 527 541 - -
Lan10g0532 1084 MobiDBLite consensus disorder prediction 504 526 - -
Lan10g0532 1084 MobiDBLite consensus disorder prediction 502 550 - -
Lan10g0532 1084 SUPERFAMILY Tropomyosin 808 966 - -
Lan10g0532 1084 PANTHER FILAMENT-PLANT-LIKE PROTEIN 1 1083 - -
Lan10g0532 1084 Coils Coil 141 175 - -
Lan10g0532 1084 Coils Coil 209 292 - -
Lan10g0532 1084 Pfam Filament-like plant protein, long coiled-coil 95 971 IPR008587 -
Lan10g0532 1084 Coils Coil 57 98 - -
Lan10g0532 1084 MobiDBLite consensus disorder prediction 1047 1068 - -
Lan10g0532 1084 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1083 - -
Lan10g0532 1084 MobiDBLite consensus disorder prediction 1024 1084 - -
Lan10g0532 1084 Coils Coil 830 927 - -
Lan10g0532 1084 Coils Coil 352 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0532 Lan-Chr10 4272045 4278567 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0532 10 4272045 4278567 Lan5g0446 5 9741255 9747161 LSH
Lan10g0532 10 4272045 4278567 Lan14g0948 14 15875468 15880660 PCT
Lan14g0948 14 15875468 15880660 Lan10g0532 10 4272045 4278567 PCT