Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0526 ATGGCTCTCCTAACTTTCTTGCCTGAACAATCTGACCCCAAAAAGAAGCAGCAACTTCCCAAACGCAAGCACAAACAAAAACAACAACAGAATCCTCAACAACAGAAACAGAAGCAAAAGGAAAAGGAGAATGAGAAACAACCTTCTTCATGGGACCAAATCAAGAACCTTATAACCTGCAAACAAATAGAAGGTTCAAGAGTGCATGACCCTTCCAAAGTTGGTTACTCCATGTTAGGGTCTTCATGCAGCTCCATATGCAGCTTCAGAGATGTTCATGGAAACACTAGAGTAGTTCATAGAGCTGATAACTCTTCCCCTGAGAGTAGCACTTTAGGTCAAGAAAATGGTTTACTCAATAGGAAACCTCTCACACCTGGCCCATCATCAACTCGTTCAGGGAAATCCATTGGTGGAACAACCTACACATCTTCCACCAGAGGAATTCATCAATTCAGAAAGCTTTCAGGCTGTTATGAATGTCACATGATCATTGACCCTAAAAGGCTACCAATTCCGAGGAGCACTGTTTGTGCTTGCTCACAGTGTGGGGAGGTCTTCCCTAAGATGGAAAGCTTGGAGCTTCACCAAGCTGTTCGACATGCTGTTTCTGAGCTTGGACCAGAGGATTCGGGTCGTAACATAGTTGAGATAATATTCAAATCAAGCTGGCTGAGGAAGGACAACACAATATGCAAGATCGAACGGATATTAAAAGTCCACAACACCCAACGCACGATCCAACGCTTCGAGGACTGCAGGGACACCGTAAAGACCCGTGCACTAAACTCCACCAAAAAAAACCCCAGGTGTGCAGCAGACGGCAACGAACTCCTACGCTTTCACTGCACCACCTTAACCTGCGCGTTAGGCTCACGCGGATCCTCCGCCTTGTGCTCCGCCGTGCCAGGCTGCGGCGTCTGCACCATCATCCGGCACGGGTTCCGTGGCGGCGACGGGAGTAAGGGTGTGAAGACCACCGCGAGTAGTGGTAGGGCCCACGACTCGGTGCAGTTTGGTGTTGAAAATAGAAGGGCTATGTTGGTGTGTCGTGTGATTGCGGGGAGAGTAAAGCGCGTGGAGAAGGACGTGCCGCTGTTGACGGAGGAGGAAAATGTGTCGGTGGTTGGGTCCTATGATTCTGTAGCTGGGTACACTGGAATCTATTCCAATCTCGAGGAGTTACTTGTTTTCAACTCAAGAGCTATTCTTCCTTGTTTTGTGGTCATTTACAAGGTGCTTCCATGTTAA 1251 0.4804 MALLTFLPEQSDPKKKQQLPKRKHKQKQQQNPQQQKQKQKEKENEKQPSSWDQIKNLITCKQIEGSRVHDPSKVGYSMLGSSCSSICSFRDVHGNTRVVHRADNSSPESSTLGQENGLLNRKPLTPGPSSTRSGKSIGGTTYTSSTRGIHQFRKLSGCYECHMIIDPKRLPIPRSTVCACSQCGEVFPKMESLELHQAVRHAVSELGPEDSGRNIVEIIFKSSWLRKDNTICKIERILKVHNTQRTIQRFEDCRDTVKTRALNSTKKNPRCAADGNELLRFHCTTLTCALGSRGSSALCSAVPGCGVCTIIRHGFRGGDGSKGVKTTASSGRAHDSVQFGVENRRAMLVCRVIAGRVKRVEKDVPLLTEEENVSVVGSYDSVAGYTGIYSNLEELLVFNSRAILPCFVVIYKVLPC* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0526 416 Gene3D - 202 413 - -
Lan10g0526 416 ProSitePatterns Zinc finger C2H2 type domain signature. 178 201 IPR013087 -
Lan10g0526 416 ProSiteProfiles Zinc finger C2H2 type domain profile. 178 206 IPR013087 -
Lan10g0526 416 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 34 414 - -
Lan10g0526 416 MobiDBLite consensus disorder prediction 1 53 - -
Lan10g0526 416 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 34 414 - -
Lan10g0526 416 Coils Coil 24 44 - -
Lan10g0526 416 MobiDBLite consensus disorder prediction 99 143 - -
Lan10g0526 416 SUPERFAMILY ADP-ribosylation 203 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0526 Lan-Chr10 4214486 4217856 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lan10g0526 None None None