Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0523 ATGTCTTTTTTTGCCACCACTTCCTCCGCCGTGGGATACTCCTTTCTTCCCCGATTCCAGCGGCGGAGGACACCTCAGTTCACGATGGTCCTCCGATCTGATCACTCAGTCTCTGTGGACCCGATCACAATCTTGACAAAACTGAAAGACGAGTGTGCCACTCCTACGCCTCTTCTTCAGCAAGTGGCTGATGCAATGTGTGCCCAAATGCGAGCTGGTCTCGCCGCCGATGGTGGCTCTGGCCTTCCCATGATACCCACTTATGTTCATGACCTCCCCACTGGGAATGAGAAAGGGTTATTTTATGCTTTGGATCTTGGTGGAACAAACTTCCGAGTGCTGAGAGTGCAGTTGGGTGGGAAAGATGAGCGTGTCGTTGCCACTGAGTTTGAGCAAGTATCCATTCCTCAGAACCTTATGTTTGGTACATCTGAGGAACTTTTTGACTTCATTGCTTTAAGGCTAGCAAATTTTGCTGCCAAAGAGGATGGTAGATTTCATTTTTCGCCAGGGAGAAAGCGAGAAATTGGGTTCACATTTTCATTTCCTGTAAAGCAGACATCTATTGACTCTGGCATATTAATCAAGTGGACCAAAGGCTTTGCAGTCTCTGGAACTACAGGAAAAGATGTGGTTGCTTGTCTGAATGAAGCAATGATAAGGCAAGGACTTCATATGAGAGTCTCTGCGCTGGTTAATGATACTGTGGGAACATTAGCTGGTGCAGAATATTATGACAATGATGTCATGGTTGCTGTCATTTTGGGTACTGGAACCAATGCTTGCTATGTTGAGCAAATCAATGCCATTCCTAAGTTACAGGGCTATGCCTCTTCTTCTGGCAAAATGATCATTAGTACTGAGTGGGGGGCATTCTCAAATGGTCTCCCTTTAACTGAGTTTGATAGAGAAATGGATGCTGCTAGCATCAATCCTGGGGAGCAGATATTTGAAAAGACAATATCAGGAATGTATCTAGGCGAAATTGTGAGACGAGTGCTACTGAAAATGGCTGAAGTGGGTGGATTGTTTGGAAAATCTGTGTCACAAAAACTAGCAATTCCTTTCATACTCAGGACCCCAGATATATGTGCTATGCAGCAGGACAATTCTGGCGATTTACAAGCCATCAGGTCCCTTCTCTATGATAAAGCTGGGGTTGAATCCAATTTAAGTGAAAGGAAAACTGTCTTAGAAGTTTGTGACACTATTGTAAAGCGAGGTGGGAACTTAGCTGGTGCTGGAGTTGTGGGGATTTTGCAAAAAATGGAAGAGAAATCGGAAGGTCTCATATTTGGGAACAGAATAGTTGTGGCCATTGATGGTGGTTTATATGAAAATTATCCTCAATACAGAGCATACTTAAAAGATTCGGTCAAGGAGCTATTAGGAACAGAAAAGTCAAACAATGTGGTAATAGATCATACAAAAGATGGATCTGGCATAGGGGCAGCTCTATTGGCAGCTTCAAACTCCATGTACAAGCACAACTTTTAG 1497 0.4389 MSFFATTSSAVGYSFLPRFQRRRTPQFTMVLRSDHSVSVDPITILTKLKDECATPTPLLQQVADAMCAQMRAGLAADGGSGLPMIPTYVHDLPTGNEKGLFYALDLGGTNFRVLRVQLGGKDERVVATEFEQVSIPQNLMFGTSEELFDFIALRLANFAAKEDGRFHFSPGRKREIGFTFSFPVKQTSIDSGILIKWTKGFAVSGTTGKDVVACLNEAMIRQGLHMRVSALVNDTVGTLAGAEYYDNDVMVAVILGTGTNACYVEQINAIPKLQGYASSSGKMIISTEWGAFSNGLPLTEFDREMDAASINPGEQIFEKTISGMYLGEIVRRVLLKMAEVGGLFGKSVSQKLAIPFILRTPDICAMQQDNSGDLQAIRSLLYDKAGVESNLSERKTVLEVCDTIVKRGGNLAGAGVVGILQKMEEKSEGLIFGNRIVVAIDGGLYENYPQYRAYLKDSVKELLGTEKSNNVVIDHTKDGSGIGAALLAASNSMYKHNF* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0523 498 SUPERFAMILY Actin-like ATPase domain 38 246 IPR043129 -
Lan10g0523 498 Gene3D - 65 477 - -
Lan10g0523 498 SUPERFAMILY Actin-like ATPase domain 248 492 IPR043129 -
Lan10g0523 498 Gene3D - 87 488 - -
Lan10g0523 498 ProSiteProfiles Hexokinase domain profile. 39 489 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Lan10g0523 498 PANTHER HEXOKINASE-LIKE 1 PROTEIN-RELATED 25 494 - -
Lan10g0523 498 PRINTS Hexokinase family signature 102 118 - -
Lan10g0523 498 PRINTS Hexokinase family signature 176 201 - -
Lan10g0523 498 PRINTS Hexokinase family signature 228 244 - -
Lan10g0523 498 PRINTS Hexokinase family signature 251 265 - -
Lan10g0523 498 PRINTS Hexokinase family signature 315 337 - -
Lan10g0523 498 PRINTS Hexokinase family signature 397 419 - -
Lan10g0523 498 PRINTS Hexokinase family signature 474 490 - -
Lan10g0523 498 CDD NBD_sugar-kinase_HSP70_actin 103 265 - -
Lan10g0523 498 PANTHER HEXOKINASE 25 494 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Lan10g0523 498 Pfam Hexokinase 251 489 IPR022673 GO:0005524|GO:0005975|GO:0016773
Lan10g0523 498 ProSitePatterns Hexokinase domain signature. 176 201 IPR019807 GO:0004396|GO:0005524|GO:0006096
Lan10g0523 498 Pfam Hexokinase 46 244 IPR022672 GO:0005524|GO:0005975|GO:0016773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0523 Lan-Chr10 4194649 4198868 Transposed