Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0522 ATGATCCGGTTTATTCTGTTGCAAAATAGGCAGGGGAAAACTCGTTTAGCCAAATACTACGTTCCTCTCGAGGAATCCGAGAAGCACAAGGTCGAATACGAGGTTCACCGCCTTGTAGTCAATCGAGACCCCAAACATACAAATTTCGTTGAGTTTCGTACCCACAAAGTGATATATCGGCGATATGCTGGCTTGTTTTTCTCGCTCTGTGTTGACATCACTGATAATGAGTTGGCATATTTAGAGAGCATCCATTTGTTTGTGGAAATATTGGATCACTTCTTCAGCAATGTGTGTGAATTGGATTTGGTCTTTAACTTCCACAAGGCTATCATTGAGAGAATGGGGGAACTGGAAAAAGTAGAGTGA 369 0.4201 MIRFILLQNRQGKTRLAKYYVPLEESEKHKVEYEVHRLVVNRDPKHTNFVEFRTHKVIYRRYAGLFFSLCVDITDNELAYLESIHLFVEILDHFFSNVCELDLVFNFHKAIIERMGELEKVE* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0522 122 Gene3D - 1 116 - -
Lan10g0522 122 PIRSF AP_complex_sigma 1 118 IPR016635 GO:0015031
Lan10g0522 122 Pfam Clathrin adaptor complex small chain 1 110 IPR022775 -
Lan10g0522 122 PANTHER AP COMPLEX SUBUNIT SIGMA 2 110 - -
Lan10g0522 122 PANTHER ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY 2 110 IPR016635 GO:0015031
Lan10g0522 122 SUPERFAMILY SNARE-like 1 111 IPR011012 -
Lan10g0522 122 CDD AP2_sigma 1 119 IPR027156 GO:0016192|GO:0030122|GO:0035615|GO:0072583
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0522 Lan-Chr10 4185833 4188588 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0522 10 4185833 4188588 Lan3g0438 3 3818641 3821109 LSH
Lan10g0522 10 4185833 4188588 Lan13g0813 13 8814925 8819261 LSH