Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0328 ATGGGAGAAATTGAAGAAATTGGACCTGATGTCTGTTCGGATATAGAAATGGATGACATTAGAGTTCAAAATATAGCCGAGAAAGATGTCAGTGATGAAGAGATTGAAGCAGAAGACTTGGAGAGACGGATGTGGAAGGATCGTATCAAGCTCAAAAGGCTCAAGGAAAAACAGAAGCTAGAAGCACAGAAAGCTGCAGAGAAGCAAAAATCCAGCTCGACAACTGATCAAGCTCGTCGGAAGAAAATGTCCAGAGCACAAGATGGGATTCTTAAGTATATGCTCAAGCTTATGGAAGTCTGCAAAGCTCGTGGATTTGTGTACGGGATCATTCCTGAGAAGGGCAAGCCGGTAAGTGGTTCCTCTGATAACATTAGAGCTTGGTGGAAAGAGAAGGTGAAGTTTGATAAGAATGGCCCTGCAGCCATAGCCAAGTATGAAGCGGAGTGCCTTGCTATGAGTGAGGCTGATAATAACCGAAACGGGAGCTCTCAGAACATTCTCCAAGACCTGCAGGATGCGACACTTGGGTCATTATTATCTTCTCTGATGCAACATTGTGATCCTCCTCAGAGGAAGTATCCATTGGAAAAGGGTGTTCCCCCTCCATGGTGGCCAACTGGGAACGAAGATTGGTGGGTACAATTGAACTTACCTCATGGTCAAAGTCCTCCTTATAAGAAGCCGCATGATTTGAAGAAGATGTGGAAAGTGGGAGTGTTAACTGCTGTCATAAAGCACATGTCGCCTAATATTGCAAAAATAAGGAGGCATGTGCGTCAGTCAAAATGCTTGCAGGACAAGATGACAGCAAAGGAAAGTGCAATTTGGCTGGGAGTGTTAAGTCGGGAAGAAGCTCTCATCAGTCAGCCTAGTAGTGATAATGGTGCATCTGGAGTAACTGAAACGCCGCCTGGTGGTCAAGTTAAAAATAAGAGGCCTGCCACTAGTAGTGATAGCAATTACGACGTCGATGGTGCTGATGATGGTGTTGGCTCTGTTTCTTCTAATGAAAATACGAGAAACCAGTTTGTGGAGGTTGAACCATCAGATAACTCACAGAGGAATTGTGTCCTTAATAAAGATCAAGTTAAGAAGCAGCCCCGGAAAAAGAGGCCGCGTTTCAGGTCTTCCTCCACTGACAAACAACCAGCAGCACAATCTGACAATGAAATCTTACATGTTGAGCCAACAGACAATACGATCAATATGAACCAGACAGAAGCACAGGTAGTTGAACTCCAGATTCATGGAAATGAACAGAGAAATGAGACAGATTCTGCTTTGAGACCCATGGAAAAAGGTTTTGAGGTGCCAACTGAACAACCAGCACCTGATTTAGACCACTTCTCTTATCTCCACTCAAACAACTTAATCCCCACAGAAAGCTTGTATATGAATGGAAGGCCACCATTGCACTATCCCGAGGTGCAAAACCCTGCCTTGCATCACGACACTACTTATAACCTTTATAATCCAGTGACAGGGTATGGCCCGAGTCATGGCGGGCTGCAGTTGCCGCCTGGAAACAGTGAACCCATTAAGCCAGAGAATGGCACAGTTGGCCCAGTTTCTATACCACCAGATGAAGTTACTGGAGGAGACTTGCAATATTTTGGTAGAGACACATTTCCAAATGAGCTTGATAGACCTATAGATCACTCTTTCTTTGGATCACCACTCAATAGCTTGCCATTAGATTTTGCACTCAACAGTCCACCATTCAACATAGATGATTTCTTGGGCGAAGATGAAATGATGCAGTACTTTGGAGCATAG 1779 0.4441 MGEIEEIGPDVCSDIEMDDIRVQNIAEKDVSDEEIEAEDLERRMWKDRIKLKRLKEKQKLEAQKAAEKQKSSSTTDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSSDNIRAWWKEKVKFDKNGPAAIAKYEAECLAMSEADNNRNGSSQNILQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPTGNEDWWVQLNLPHGQSPPYKKPHDLKKMWKVGVLTAVIKHMSPNIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREEALISQPSSDNGASGVTETPPGGQVKNKRPATSSDSNYDVDGADDGVGSVSSNENTRNQFVEVEPSDNSQRNCVLNKDQVKKQPRKKRPRFRSSSTDKQPAAQSDNEILHVEPTDNTINMNQTEAQVVELQIHGNEQRNETDSALRPMEKGFEVPTEQPAPDLDHFSYLHSNNLIPTESLYMNGRPPLHYPEVQNPALHHDTTYNLYNPVTGYGPSHGGLQLPPGNSEPIKPENGTVGPVSIPPDEVTGGDLQYFGRDTFPNELDRPIDHSFFGSPLNSLPLDFALNSPPFNIDDFLGEDEMMQYFGA* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0328 592 MobiDBLite consensus disorder prediction 288 323 - -
Lan10g0328 592 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 11 578 IPR006957 GO:0005634
Lan10g0328 592 SUPERFAMILY DNA-binding domain of EIN3-like 166 288 IPR023278 GO:0003700|GO:0005634
Lan10g0328 592 MobiDBLite consensus disorder prediction 332 361 - -
Lan10g0328 592 Pfam Ethylene insensitive 3 38 285 IPR006957 GO:0005634
Lan10g0328 592 Gene3D - 72 148 IPR023278 GO:0003700|GO:0005634
Lan10g0328 592 Gene3D - 157 296 IPR023278 GO:0003700|GO:0005634
Lan10g0328 592 Coils Coil 23 68 - -
Lan10g0328 592 PANTHER ETHYLENE INSENSITIVE 3-LIKE 3 PROTEIN 11 578 - -
Lan10g0328 592 MobiDBLite consensus disorder prediction 288 392 - -
Lan10g0328 592 MobiDBLite consensus disorder prediction 60 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0328 Lan-Chr10 2193067 2196246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0328 16 558 EIL Transcription Factor Family AT1G73730 54.741 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Lan10g0328 EIN3 3.1e-127 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2184 6 32221827 32224806 Lan10g0328 10 2193067 2196246 LSH
Lan10g0328 10 2193067 2196246 Lan3g0263 3 1753268 1756086 LSH