Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1579 ATGGTTTATACTTCCATCCCAGCTTATATTGATCCAGCTAACTGGCAGCAACAGCAACCAAATCATCAAGTTGGCAACAATAGTGCCAGCTCACATCTTCTTCCACCACCTCCACCATCATCTCAGCCTAATGGAGCTGGCAATACCGGCTCCATTAGGCCGGGCTCGATGGCGGATAGGGCTAGAATAGCCAACATACCTATGCAAGAGATACCACAAAAATGTCCAAGATGTGAATCTACCAACACCAAATTTTGCTACTTCAACAACTACAGCCTCTCTCAGCCTCGCCACTTCTGCAAGACCTGCAGAAGGTACTGGACACGTGGCGGGGCCTTGAGGACCGTCCCCGTTGGCGGCGGCTGCCGGAGGAACAAGAGAAGCAAGGGAAGTAGCAGCAACAACAGCTCCATGTCCTCGCCGGTGAGTTCAGATCGCCAGACACTCAGTGCCAACTCCAACAACTCAATCTCCTCTTCTGATATGGTAGGCCTTGGGCCTCCGGTGCCGCCTCCGTTTAGGTTCATGTCTCCATTGCATCAACTTGGTGAAAACTTTGCAAGTGGTGGAGAAATAAGCTTAAACTATGGCATGAACTATGACAACATTCCAAGTCAAATGGGAGGAGGAGGAGGAGACTTGAATTTTCACATAGGAAATACTTTAGGCCATGGTGGTGGTGGTGGTGGCGGTGGTTCTATCTTATCTGCAGCTGGTTTGGAGCAATGGAGGGTGCCACAAACTCATCAATTTCCTTTCTTGACAGGTTTGGAAGCTTCATCACATGGCTTGTACCACTCATTTGAAGGTAATAGTACTAATCCGACCACCACATACGGTGATATCCGGCCGAAGGCATCGACTTCCGGTGTGATGTCTCAGATGGCTTCAGTTAAAATGGAGGAGAGTGGTCAACAACTTAATTTGTCAAGAGAGTTTTTGGGAATCAATAGTTCAGCTAGTGGGCAATATTGGAATACTAGTGATGTTGGTGGTTCTACAACACCAGCTTGGACAAATCTTTCTGGTTTTAGCTCTACTAGTAATCAACTATAG 1056 0.4763 MVYTSIPAYIDPANWQQQQPNHQVGNNSASSHLLPPPPPSSQPNGAGNTGSIRPGSMADRARIANIPMQEIPQKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRTVPVGGGCRRNKRSKGSSSNNSSMSSPVSSDRQTLSANSNNSISSSDMVGLGPPVPPPFRFMSPLHQLGENFASGGEISLNYGMNYDNIPSQMGGGGGDLNFHIGNTLGHGGGGGGGGSILSAAGLEQWRVPQTHQFPFLTGLEASSHGLYHSFEGNSTNPTTTYGDIRPKASTSGVMSQMASVKMEESGQQLNLSREFLGINSSASGQYWNTSDVGGSTTPAWTNLSGFSSTSNQL 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1579 351 Pfam Dof domain, zinc finger 73 127 IPR003851 GO:0003677|GO:0006355
Lal9g1579 351 MobiDBLite consensus disorder prediction 13 31 - -
Lal9g1579 351 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 5 349 IPR045174 GO:0003700|GO:0006355
Lal9g1579 351 PANTHER DOF ZINC FINGER PROTEIN DOF3.6 5 349 - -
Lal9g1579 351 MobiDBLite consensus disorder prediction 13 55 - -
Lal9g1579 351 ProSiteProfiles Zinc finger Dof-type profile. 73 127 IPR003851 GO:0003677|GO:0006355
Lal9g1579 351 MobiDBLite consensus disorder prediction 126 162 - -
Lal9g1579 351 ProSitePatterns Zinc finger Dof-type signature. 75 111 IPR003851 GO:0003677|GO:0006355
Lal9g1579 351 MobiDBLite consensus disorder prediction 117 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1579 Lal-Chr9 18134975 18136809 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1579 52 326 C2C2-Dof Transcription Factor Family AT5G02460 42.812 1.16e-51 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lal9g1579 zf-Dof 2.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1579 - - gmx:100796820 371.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g1579 9 18134975 18136809 Lal9g1579 9 18134975 18136809 ECH