Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0699 ATGGCTTATTCACAAATTGATTCTGATGGAGGAATTGACTACATGTTCAAGATTGTCTTGATTGGGGATTCTGGGGTTGGTAAGTCTCAGCTTTTGCATCGGTTTGTCAAAAATGAATTCAACTTGAAATCCAAATCCACAATTGGGGTTGAGTTTCTCACCAAGACTATTGTCATGGATCACAAAATTGTCAAGGCTCAGATTTGGGACACTGCTGGTCAAGAAAGGTACCAAGCAATTACAACTGCATATTACAGAGGTGCAATTGGCGCTTTACTAGCGTATGACATAACCAAGCGCCGATCCTTTGATCATGTTGAAAAGTGGCTGGAGGAGCTACGGATGCATGCCGATAAAAACATAGCTATCATGCTTGTTGGCAACAAGTCTGACCTGACTGCTCGCGAAGTGCCTACTGAGTTTGCCAAAGAATTTGCCGAGCAGCAAGATCTCTTCTTCATTGAGACGTCAGCACTTAACTCTAGCAATGTGGAGTCAGCTTTCCATGGTCTCCTCTCTCAAGTATATGAAAATGTCATTAAGAAGCACATCACAGCAGATGGACATGAACCAAATTGGGATAAAGTAAACCTTGAACTTGAAGGAACACAAATCAAGGTCAAATCTGAAGAACTTGAAAACAAGAAAGATAAAAGGAAATTCGAATGTTGTACTGTTACTTAG 684 0.4094 MAYSQIDSDGGIDYMFKIVLIGDSGVGKSQLLHRFVKNEFNLKSKSTIGVEFLTKTIVMDHKIVKAQIWDTAGQERYQAITTAYYRGAIGALLAYDITKRRSFDHVEKWLEELRMHADKNIAIMLVGNKSDLTAREVPTEFAKEFAEQQDLFFIETSALNSSNVESAFHGLLSQVYENVIKKHITADGHEPNWDKVNLELEGTQIKVKSEELENKKDKRKFECCTVT 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0699 227 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 182 IPR027417 -
Lal9g0699 227 ProSiteProfiles small GTPase Rab1 family profile. 11 224 - -
Lal9g0699 227 ProSiteProfiles small GTPase Rho family profile. 9 186 - -
Lal9g0699 227 SMART rab_sub_5 16 178 - -
Lal9g0699 227 SMART rho_sub_3 18 178 IPR001806 GO:0003924|GO:0005525
Lal9g0699 227 TIGRFAM small_GTP: small GTP-binding protein domain 14 169 IPR005225 GO:0005525
Lal9g0699 227 SMART ran_sub_2 21 220 - -
Lal9g0699 227 PANTHER RAB GTPASE-LIKE PROTEIN G3A 1 225 - -
Lal9g0699 227 ProSiteProfiles small GTPase Ras family profile. 4 227 IPR001806 GO:0003924|GO:0005525
Lal9g0699 227 PRINTS Transforming protein P21 ras signature 16 37 - -
Lal9g0699 227 PRINTS Transforming protein P21 ras signature 39 55 - -
Lal9g0699 227 PRINTS Transforming protein P21 ras signature 57 79 - -
Lal9g0699 227 PRINTS Transforming protein P21 ras signature 119 132 - -
Lal9g0699 227 PRINTS Transforming protein P21 ras signature 153 175 - -
Lal9g0699 227 CDD Rab11_like 13 176 - -
Lal9g0699 227 SMART ras_sub_4 16 178 - -
Lal9g0699 227 Pfam Ras family 17 176 IPR001806 GO:0003924|GO:0005525
Lal9g0699 227 Gene3D - 7 221 IPR027417 -
Lal9g0699 227 PANTHER - 1 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0699 Lal-Chr9 4821789 4824588 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0699 9 4821789 4824588 Lal9g0699 9 4821789 4824588 ECH
Lal1g0720 1 4832365 4835325 Lal9g0699 9 4821789 4824588 LSH