Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0682 ATGGAGTCAGAAGGGGAAGCTGGGGAAAAGCCAATGATGGCATTGGATGGCCAAGTTTGCCAGATATGTGGCGATAATGTTGGGAAGACTGTGGATGGTGAACCATTTGTTGCGTGCGATGTTTGTGCTTTCCCTGTCTGCAGGCCTTGCTATGAGTATGAAAGGAAGGATGGGAAGCAGTTTTGCCCCCAGTGCAAAATACGGTACAAGAGGCACAAAGGAAGTCCTGCAATTCTTGGAGACAGGGAAGGGGATGGCGGCGCTGATGATGGTGCCAGTGACTTCAATTACGATTTAGAACATCAGAACCAAAAGCAGAAAATTTCAGAGTGCATGTTAAGCTGGCACATGACTTACCATCGAGCCGAGGAGGTTGGTGCTCCAAATTATGACAAGGATGTTTCACACAACCACATTCCTCGGCTCACCAATGGACAAGAGCTGTCTGGAGAGTTATCTGCAGACTCACCCGAGCAGCTCTCAATGGCATCTCCTGAAGTTGGTGGCAGGAAGCATGCTCATATTCTTCCGTATTTGTCTGATGATAATCAATATCCAAATGTTAGGGTTATGGATTCAGGATTGGGAAATGTAGCGTGGAAAGAAAGGGTTGATAGCTGGAAGTTGAAGCAAGACAAGAATGTTTTTCCAATGACTACATGCCTACCTGCTTTTGATAGAGGAGCTGGCGATATTGATGCTTGTATTGATGTTCTTGCGGATGATTCCTTGTTGAATGATGAAGCTCGGCAACCTCTTTCTAGGAAGGTTTCTATTCCATCATCTAAGATTAATCCATATCGACTGGTCATTGTTCTGCGCCTGGTTGTCCTCTGCATTTTCTTGCATTATCGAATAACAAATCCAGTGCCCGATGCATATCCATTGTGGCTGGTATCAGTTATATGTGAGATTTGGTTTTCCATATCTTGGATATTGGATCAATTCCCTAAGTGGTTTCCGGTAAACCGTGAAACATATCTTGACCGGCTTGCACTGAGATACGAACGTGAAGGAGAACCGGCACAGTTAGCAGCTATCGACGTTTTTGTCAGTACCGTTGACCCGTTGAAGGAGCCTCCACTTGTGACTTCGAATACAGTACTATCTATTCTTGCTGTTGACTACCCAGTGGATAAGGTCTCCTGTTATGTCTCTGATGATGGTGCTTCTATGTTGACATTTGAAGCCCTTGCCGAGACATCAGAATTTTCAAGGAAATGGGTTCCTTTTTGCAAGAAGTACAACATTGAACCGCGTGCACCTGAGTGGTACTTCACACAGAAGATTGACTACTTGAAAGATAAGGTTCGACCATCATTTGTCAAGGATCGTCGAGCAATGAAGAGAGAATATGAAGAATTTAAAATTCGTATTAATGGACTCGTTGCGAAGGCAACACAGGTTCCAGACGAAGGATGGGTGATGCAAGACGGTACACCATGGCCTGGGAATAACACCAGAGACCATCCAGGAATGATCCAGGTTTTCTTGGGTCAAAGTGGAGGAATTGACTCTGACGGTAATGAACTTCCCCGTTTAGTGTATGTTTCTCGCGAAAAGCGTCCAGGGTTCCAACATCACAAGAAGGCTGGTGCCATGAATGCACTTGTCCGTGTATCTGCCGTCCTTACTAATGGACCCTTTTTATTGAATCTTGATTGCGATCACTACATAAACAACAGCAAGGCTTTGAGGGAAGCTATGTGTTTTATGATGGATCCCAACCTTGGGAAACATGTCTGTTTTGTCCAGTTTCCGCAGAGGTTTGATGCTATTGATAAGAATGATCGATATGCCAACCGTAATACAGTTTTCTTTGATATAAACTTGAGAGGTTTGGATGGTATTCAAGGTCCTGTTTACGTGGGTACCGGATGCGTCTTCAATAGGACAGCTTTATATGGTTATGAACCTCCTCTTAAACCCAAGCATAAAAAGCCCGGGTTGCTATCTTCACTCTGTGCTGGAGATCGGAAGAAGAGTTCAGAATCTAGCAGGAAAGGATCAAAGAAGAAAAAATCTAGCAAACACGTTGAACCAACTGTGCCTATCTATACCTTAGAGGATATAGAAGAAGGAATAGAAGGTACTGGATTTGATGATGAGAAAGCACTACTTATGTCACAAATGAGACTTGAGAAAAGGTTTGGCCAGTCTTCTGTTTTTGTTGAATCTACCCTTATGGAGAATGGTGGTGTTCCTCAGTCTGAGACTCCAGAAACTCTTCTTAAGGAGGCTATTCATGTTATTAGCTGTGATTATGAGGATATAACAGAGTGGGGAACTGAGATAGGATGGATATATGGTTCTGTCACAGAAGATATTCTGACTGGATTTAAGATGCACGCCCGTGGTTGGCGGTCTATTTACTGCATGCCTAAGCTCCCAGCATTTAAAGGGTCTGCTCCTGTCAATCTTTCTGATCGTCTGAACCAAGTGCTTCGGTGGGCTTTAGGTTCTGTGGAAATTCTCTTTAGTCGACATTGTCCTCTCTGGTATGGTTATGGTGGAAGGTTAAAGTGGCTCGAGAGGTTCGCATATGTGAACACCACAGTCTATCCAGTCACATCCATTCCCCTTCTCATGTATTGTACCTTGCCTTCTGTCTGTCTTCTAACTAACAAGTTTATTATTCCTCAGATTAGTTACCTTGCAAGTTTATGGTTCATCTCTCTGTTTATTTCAATCTTTGCAACGGGAATACTCGAGATGAGATGGAGTGGTGTTGGAATTGACGAGTGGTGGAGAAACGAACAGTTTTGGGTTATCGGCGGTGTCTCAGCGCATCTTTGTGCCGTATTCCAAGGTTTACTGAAAGTGCTTGGTGGAATTGACACCAACTTCACTGTTACTTCAAAGGCATCAGATGAAGATGGAGACTTTGCAGAACTCTACGTGTTCAAATGGACATTTCTTCTTATTCCACCATCAACTCTTCTCATCATAAACTTGGTAGGGATTATTGCAGGCATCTCCTATGCCATTAGCAGTGGTTACCAATCATGGGGTCCCCTTTTTGGTAAACTTTTGTTTGCATTTTGGGTCATCGTCCATCTCTATCCCTTCCTCAAAGGTCTCATGGGACGCCAAAAACGAACGCCGACCATCGTCGTGGTTTGGTCCATTTTACTTGCATCCATTTTTTCTCTCTTATGGGTCCGAGTCAATCCCTTTGCTACAAGAGTCATTGGTCCTAATGTGGAGGAGTGTGGAGTTAACTGCTAG 3228 0.439 MESEGEAGEKPMMALDGQVCQICGDNVGKTVDGEPFVACDVCAFPVCRPCYEYERKDGKQFCPQCKIRYKRHKGSPAILGDREGDGGADDGASDFNYDLEHQNQKQKISECMLSWHMTYHRAEEVGAPNYDKDVSHNHIPRLTNGQELSGELSADSPEQLSMASPEVGGRKHAHILPYLSDDNQYPNVRVMDSGLGNVAWKERVDSWKLKQDKNVFPMTTCLPAFDRGAGDIDACIDVLADDSLLNDEARQPLSRKVSIPSSKINPYRLVIVLRLVVLCIFLHYRITNPVPDAYPLWLVSVICEIWFSISWILDQFPKWFPVNRETYLDRLALRYEREGEPAQLAAIDVFVSTVDPLKEPPLVTSNTVLSILAVDYPVDKVSCYVSDDGASMLTFEALAETSEFSRKWVPFCKKYNIEPRAPEWYFTQKIDYLKDKVRPSFVKDRRAMKREYEEFKIRINGLVAKATQVPDEGWVMQDGTPWPGNNTRDHPGMIQVFLGQSGGIDSDGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCFVQFPQRFDAIDKNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHKKPGLLSSLCAGDRKKSSESSRKGSKKKKSSKHVEPTVPIYTLEDIEEGIEGTGFDDEKALLMSQMRLEKRFGQSSVFVESTLMENGGVPQSETPETLLKEAIHVISCDYEDITEWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKLPAFKGSAPVNLSDRLNQVLRWALGSVEILFSRHCPLWYGYGGRLKWLERFAYVNTTVYPVTSIPLLMYCTLPSVCLLTNKFIIPQISYLASLWFISLFISIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLCAVFQGLLKVLGGIDTNFTVTSKASDEDGDFAELYVFKWTFLLIPPSTLLIINLVGIIAGISYAISSGYQSWGPLFGKLLFAFWVIVHLYPFLKGLMGRQKRTPTIVVVWSILLASIFSLLWVRVNPFATRVIGPNVEECGVNC 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0682 1075 Pfam Zinc-binding RING-finger 10 85 IPR027934 -
Lal9g0682 1075 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 95 IPR013083 -
Lal9g0682 1075 MobiDBLite consensus disorder prediction 644 678 - -
Lal9g0682 1075 Pfam Cellulose synthase 347 1067 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lal9g0682 1075 MobiDBLite consensus disorder prediction 148 167 - -
Lal9g0682 1075 SUPERFAMILY RING/U-box 5 86 - -
Lal9g0682 1075 CDD mRING-HC-C4C4_CesA_plant 18 68 - -
Lal9g0682 1075 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 487 638 IPR029044 -
Lal9g0682 1075 SUPERFAMILY Nucleotide-diphospho-sugar transferases 361 869 IPR029044 -
Lal9g0682 1075 PANTHER CELLULOSE SYNTHASE 5 1075 - -
Lal9g0682 1075 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 5 1075 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0682 Lal-Chr9 4708562 4716183 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0682 9 4708562 4716183 Lal9g0682 9 4708562 4716183 ECH
Lal1g0712 1 4765613 4772846 Lal9g0682 9 4708562 4716183 LSH
Lal9g0682 9 4708562 4716183 Lal20g0652 20 6019811 6027755 PCT