Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0680 ATGGAGGAAGAGAAGAACAGTGTTATAGTGAAAGTGCAACCAAAACCCAGAAAAGGGTTCATTTCAATAGTCATTGATTTGTTGGAGAAGTTGCTGGTTAAGTTGTTCTATAATTCTTCACGGCCACATCATTACCTTGCTGGTAATTTTGCACCTGTTGATGATGAGACCCCTCCAACTAAGGATCTTCATGTTATAGGCTACCTTCCGGATTGCTTGAATGGAGAATTTGTTAGGGTGGGACCTAATCCAAAGTTTGCTCCTGTGGCTGGATATCACTGGTTTGATGGAGATGGAATGATTCATGGTTTGCGAATCAAAGATGGAAAAGCTGCATATGTTTCGCGTTTTGTGAGAACTTCTCGTCTCAAACAAGAAGAATCCTTTGGAGGCGCCAAATTTATGAAGATTGGAGATCTCAAGGGTCTGTTTGGACTGTTAGTGGTTAACTTGCAAATGTTAAGAAATAAATTGAAAGTACTGGATGTTTCTTATGGAAATTCAACAGCTAATACAGCACTTGTTTATCACCATGGGAAGCTTCTAGCACTCTCAGAAGTAGATAAGCCTTATGTTATTAAAGTTATTGAAGATGGTGATTTGCAGACACTCGGTTTGCTAGATTATGACAAGAGATTGAGCCATTCCTTCACTGCTCATCCAAAAGTTGACCCAGTTACTGGTGAGATGTTTACATTTGGCTATTCACAAACACCACCATATATCACATACAGAGTAATTTCAAAGGATGGGTATATGCATGATCCTGTACCCATAACTGTACCAGAGTCTATCATGATGCATGACTTTGCCATCACAGAGAATTATGCAATATTCATGGATCTTCCCATGTATTTTAGACCAAAGGATATGGTGAAGAAGAACACACTGGTATACTCATTTGATTCAACCAAGAAAGCTCGTTTCGGTATTCTACCTCGATATGCTAAGGACGAGAAGCATATTAGATGGTTTGAACTTCCAACCTGCTTCATTTTCCATAATGCCAATGCGTGGGAGGAGGGGGACGAAGTTGTTCTGATCGCGTGCCGCATAGAGAAACCAGATTTGGACTTGGTTAGCGGAGCTCTGAAGGAAAAGCTTGAAAGTTTCGCAAATGAGCTGTATGAAATGAGATTTAACATGAAAACTGGTGAAGCTTCTCAAAAGAAACTATCAGCACCTGCCCTGGATTTTCCTAGGGTGAATGAAAACTACACTGGCAGGAAGCAGCGATACGTATATGGAACCACATTAGACAACATCGCGAAAGTTACCGGGATCATTAAATTTGATTTGCATGCCAAACCAGATTCAGGAAAAACAAGGCTTGAAGTTGGAGGAAATGTTCAGGGTCTCTATGACTTAGGACCAGGTAAATTTGGTTCTGAGGCTGTTTATGTTCCGCGTGTCCCTGGCACCGATTCTGAAGAAGATGATGGATACTTGATCTTTTTCGTACATGACGAGAATAGCAGAAAATCATTTGTGCATGTCATTGATGCAAGAACAATGTCAGCGGATCCTATTGCTGTTGTTGAATTGCCTCATAGAGTTCCATATGGTTTCCATGCCTTCTTTGTCACAGAGGAACAACTGCAAGAACAGGCAAAACTCTGA 1620 0.408 MEEEKNSVIVKVQPKPRKGFISIVIDLLEKLLVKLFYNSSRPHHYLAGNFAPVDDETPPTKDLHVIGYLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKAAYVSRFVRTSRLKQEESFGGAKFMKIGDLKGLFGLLVVNLQMLRNKLKVLDVSYGNSTANTALVYHHGKLLALSEVDKPYVIKVIEDGDLQTLGLLDYDKRLSHSFTAHPKVDPVTGEMFTFGYSQTPPYITYRVISKDGYMHDPVPITVPESIMMHDFAITENYAIFMDLPMYFRPKDMVKKNTLVYSFDSTKKARFGILPRYAKDEKHIRWFELPTCFIFHNANAWEEGDEVVLIACRIEKPDLDLVSGALKEKLESFANELYEMRFNMKTGEASQKKLSAPALDFPRVNENYTGRKQRYVYGTTLDNIAKVTGIIKFDLHAKPDSGKTRLEVGGNVQGLYDLGPGKFGSEAVYVPRVPGTDSEEDDGYLIFFVHDENSRKSFVHVIDARTMSADPIAVVELPHRVPYGFHAFFVTEEQLQEQAKL 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0680 539 PANTHER BETA-CAROTENE DIOXYGENASE 4 535 IPR004294 GO:0016702
Lal9g0680 539 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE 1-3 4 535 - -
Lal9g0680 539 Pfam Retinal pigment epithelial membrane protein 50 528 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0680 Lal-Chr9 4684934 4693913 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0680 9 4684934 4693913 Lal9g0680 9 4684934 4693913 ECH
Lal2g0882 2 5744187 5751912 Lal9g0680 9 4684934 4693913 LSH