Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0676 ATGGCTTCTTCTCACTCTCATTCTATTGCAGATATTAAGGGAGCAAAAGTTCTCATGGTCGGTGCTGGTGGAATTGGCTGCGAGCTTCTCAAGACTCTTGCTCTCTCTGGTTTCCGTGATATACACATCATCGACATGGACACCATAGAAGTCAGTAATCTGAACAGACAATTTTTATTTCGACAATCTCATGTTGGGCAATCCAAGGCTAAAGTTGCTAGGGACGCTGTTTTAAAATTTAGGCCTGATATAAGCATTACATCATACCATGCAAACGTTAAAGATCCTGACTTCAATGTGGACTTCTTTAAGCAATTTAGTGTTGTTTTAAATGGACTTGACAATCTAGATGCACGCCGTCATGTGAATCGCTTGTGCTTGGCAGCTGATGTTCCTTTGGTTGAAAGTGGGACTACTGGGTTCCTTGGACAGGTCACTGTACATGTCAAGGGAAAAACAGAGTGCTATGAGTGTCAGCCTAAACCTGCCCCCAAGACATATCCTGTTTGTACTATCACAAGTACACCATCTAAGTTTGTTCACTGTATTGTGTGGGCAAAGGACCTACTTTTTGCGAAGTTACTTGGTGACAAGAAACAGGAAAATGATTTAAATGTACGATCAAGTGATGCTGCCAGCTCATCCAAAAATGTAGATGATGTATTTGAACGTAGGAAAGATGAAGACATTGAACAATATGGAAGGAAAATCTTCGATCATGTGTTTGGGTATAACATTGATTTAGCTTTGTCTAATGAAGAGACATGGAAAAATCGTTATAGACCAAAACCTATATACAGCAAGGATGTCTTATCTGAACTTGCTCCGCGGAATGGAAACGTGGACAATAGTCATGCATCAGATGGTGGATTATCAGTCTCTGCTATGGCATCTTTGGGCATGAAGAACCCACAAGATATCTGGAGTGTTAACGAAAATTCTAGAATATTTCTGGAAGCGCTGAGACTATTTTTCACAAAGAGGGAGAAGGAGGTTGGCAATCTGTGCTTTGATAAAGATGATCAGTTAGCTGTGGAATTTGTTACTGCAGCTGCAAACATACGGGCTGCTTCATTTGGCATCCCTCTGCACAACCTTTTTGAAGCTAAAGGTATTGCTGGTAATATTGTGCATGCTGTTGCCACAACAAACGCTGTTATTGCTGGATTGATTGTCATTGAAGCAATCAAAGTGCTGCGAAATGACATAAAAAGTTATAGAATGACATATTGTCTGGAACATCCATCAAGAAACATGCTGCTTATGCCTGTGGAGCCATTTGAACCTAACAAGTCTTGTTATACACCCTTATCACTTGAAATAAACACAAACCGTTCAAAGTTGAAGGACTTGGTTGAAAAGATTGTCAAGGCAAAGCTTGGGATGGACCTTCCTCTTATCATGAACGCTTCATCTCTTCTTTACGAAGCTGGTGATGTTGAGGATGACATGGTTGCAATTTATGAAGCCAACCTTGAAAAGGTGCTTGCTGAGCTTCCTTCTCCAGTAACAGGTGGTACGATGCTTACAATAGAGGATTATCAGCAGGAACTCAAGTGCAATATTAACATCAGCCACAGAGAAGAATTTGATGAGGAGAAAGAACCTGATGGGATGGTTCTCTCAGGATGGACTCAACCTGTGTCGAACCCAGAAAATAAAGACAAGTCTATTGGTAATGGTGCAAGCACCTCAGATGCAACAATAGCAGCTGCAGAATCTGAGAAGGACGATGAGATAGGTATAGTTTCTCCCTTAAAGAAACGGAAACTTCCTGATGATTCTGATATTTCAAAACTTGCTGCCGAAACAAACAATCACAAGCAATTGCAAGTGATCGACGATGAAGACGATCTTGTTGTGCTTGAGGGGAACTTAGATGGCTTTAAAAAGAAAAGATTGTGA 1905 0.4084 MASSHSHSIADIKGAKVLMVGAGGIGCELLKTLALSGFRDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPDISITSYHANVKDPDFNVDFFKQFSVVLNGLDNLDARRHVNRLCLAADVPLVESGTTGFLGQVTVHVKGKTECYECQPKPAPKTYPVCTITSTPSKFVHCIVWAKDLLFAKLLGDKKQENDLNVRSSDAASSSKNVDDVFERRKDEDIEQYGRKIFDHVFGYNIDLALSNEETWKNRYRPKPIYSKDVLSELAPRNGNVDNSHASDGGLSVSAMASLGMKNPQDIWSVNENSRIFLEALRLFFTKREKEVGNLCFDKDDQLAVEFVTAAANIRAASFGIPLHNLFEAKGIAGNIVHAVATTNAVIAGLIVIEAIKVLRNDIKSYRMTYCLEHPSRNMLLMPVEPFEPNKSCYTPLSLEINTNRSKLKDLVEKIVKAKLGMDLPLIMNASSLLYEAGDVEDDMVAIYEANLEKVLAELPSPVTGGTMLTIEDYQQELKCNINISHREEFDEEKEPDGMVLSGWTQPVSNPENKDKSIGNGASTSDATIAAAESEKDDEIGIVSPLKKRKLPDDSDISKLAAETNNHKQLQVIDDEDDLVVLEGNLDGFKKKRL 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0676 634 Gene3D - 435 623 - -
Lal9g0676 634 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 12 479 IPR035985 GO:0008641
Lal9g0676 634 Pfam Ubiquitin-activating enzyme, SCCH domain 330 370 IPR019572 -
Lal9g0676 634 MobiDBLite consensus disorder prediction 571 594 - -
Lal9g0676 634 PIRSF SUMO_E1B 3 617 IPR030661 GO:0016925|GO:0019948
Lal9g0676 634 MobiDBLite consensus disorder prediction 544 594 - -
Lal9g0676 634 CDD Uba2_SUMO 16 435 - -
Lal9g0676 634 Gene3D - 4 110 IPR042449 -
Lal9g0676 634 Gene3D Ubiquitin activating enzymes (Uba3). Chain: B, domain 2 165 375 IPR023318 -
Lal9g0676 634 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 9 552 IPR045886 -
Lal9g0676 634 PANTHER SUMO-ACTIVATING ENZYME SUBUNIT 9 552 - -
Lal9g0676 634 MobiDBLite consensus disorder prediction 544 570 - -
Lal9g0676 634 Pfam ThiF family 10 434 IPR000594 -
Lal9g0676 634 Pfam Ubiquitin/SUMO-activating enzyme ubiquitin-like domain 439 530 IPR028077 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0676 Lal-Chr9 4651704 4658101 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0676 9 4651704 4658101 Lal9g0676 9 4651704 4658101 ECH
Lal1g0708 1 4725361 4732468 Lal9g0676 9 4651704 4658101 LSH
Lal2g0771 2 4947206 4953718 Lal9g0676 9 4651704 4658101 LSH