Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0675 ATGGTTATCCTCCTGGCCATTTTGTTCTTGGCCTTTTTTTCTTCTCATGCATATTCAGCAGGTCCTGTTTCATCTTTCACTCCAAAAGATAACTTTCTCATTGATTGTGGTGCAGAAAATCCACCTACCCTCCCTGATGGAAGACAATTTAAATCAGACCCTCAAGCCAATTCTTTCTTACAAGCCAATGATGACTATAAGGTTTCAGATGGTGGTAATCATGAGCTTCCTTCACCTATATATAAAACTGCAAGGATCTTCATTCAGGAAGCTAAGTATTCCTTCCATTTGGTTCAGCCAGGATATCATTGGATTCGGCTTCATTTTTATCCGGTAAAGAACAATGTCTTTGATCTTCACAAGGCCACTTTTTCTGTTCACACAAATGTCTATGTCCTTCTTCATAGTTTCAATGTTAATAATACTGATAAGCCAATCCTCAAGGAGTACCTCATCAATGCAAATGAATCACAATTCACCTTGATATTCACTCCCTTAAAGAACTCGGCTGCATTCATCAATGCCATTGAGGTTGTTTCAGCTCCTGATAATCTGATATTTGACACTGGTGCTGCCCTTTTCCCGGTCGGTGATATTTCTGGCCTAACAAGTTATGGTATGCAACCTGTTTATAGGCTCAACAATGGAGGACCCTTGATCACCTCATCAAATGATACCCTTGGAAGAACTTGGGAAAATGATGAGCCTTTCCTCACAAATAAGAACTTGGCGAAGAGTGTTTCGGTGGCTACCAATGCGATTAAGTTCCCTACCGATACGCCAACAATTTCTCCTTTGGTTGCACCACAATCTGTGTATGCTTCTGCTACTGAGATGGGTGATGCTGGTGTTAATCAACCAAATTTCAATGTGACATGGAAATTTGATGTGGATATTTCTTTTAGTTACCTTGTTAGGCTGCATTTCTGTGACATTGTCAGCAAAGGGCTTAATGAACTCTACTTTAATGTCTATGTTAATGGGAAAATGGCAATTTCAAACTTGGATTTATCGGCTATTACAGGCGCCTTGTCGACACCATACTACAAAGACATTGTGGTGAATGCTACATTGATGTCAGAGGGACTAATAGTTCAGGTTGGGCCAGCAAAAGCTGAAGGTGGAAATGCCAATGCTATTGTGAATGGAATAGAAGTTATGAAGTTGAGCAACTCAGTTGATAGTTTGGATGGAGAATTCGGTGTTGATGGAAGAAAGGCTGGTGGTTCTAACCGTGGGACGGTGGCGGCTGCTGGATTTGCCATGATGTTTGGAGCCTTTGTTGGTCTAGGTGCCATGGTAGTCAAGTGGCACAGGAGGCCTCAGGATTGGCAAAAGAGGAATAGCTTCTCTTCATGGTTACTTCCTCTACATGCCGGCGATACAAGCTTCACTGGCAGCAAGAGCAATATGTACTCCTCAACTATGGGGTTAGGGAGGTATTTCTCCTTTGCAGAATTGCAGGAAGCAACCAAGAACTTTGATTCCAAGGCCATTATCGGTGTTGGTGGATTCGGCAATGTATATTTGGGTGTGATTGACGAGGGAACTAACGTGGCAGTGAAGAGAGGAAATCCACAATCAGAACAAGGTATAACAGAATTCCAAACAGAAATTCAAATGTTGTCCAAGCTTAGACATAGGCATTTGGTGTCCTTGATCGGATATTGTGATGAGAATGAAGAGATGATCCTGGTTTATGAGTACATGCCTAATGGACATTTCAGAGACCATCTTTATGGAAAGAACTTGCCTGTTCTTTCTTGGAAGCAAAGGTTAGAGGTCTGTATCGGATCGGCTCGAGGCCTTCACTACCTTCACACTGGCGCAGCACAAGGCATCATTCATCGCGATGTCAAGACTACAAACATTTTGCTTGATGAAAATTTCACAGCCAAGGTATCTGATTTCGGACTTTCAAAGGATGCACCTATGGGCCAGGGTCATGTTAGCACAGCAGTAAAGGGTAGCTTTGGTTATCTAGACCCTGAGTACTTCAGGAGGCAGCAATTGACTGAAAAATCCGATGTGTACTCATTCGGCGTAGTCCTTCTCGAGGCACTTTGTGCAAGGCCAGCAATTAACCCTCAGTTGCCCCGCGAACAAGTAAACTTGGCTGATTGGGCTATGCAGTGGAAGAGGAAGGGCTTGCTTGACAAAATCATTGACCCTCTTCTTGTCGGTAACATCAATCCGGAATCTATGAAGAAGTTTGCTGAGGCTGCTGAGAAATGTTTGGCTGATTATGGAGTTGATAGGCCTTCAATGGGAGATGTACTATGGAACTTGGAGTATGCATTGCAGCTTCAAGAAGCTTCCACAGAAGGAAAAACTGAAGATGAGAATGATATCAAGTCCACACATGCTTCCACACCTTCCACCAACTCAGATGACCATGAAACACCACCACAACCACTAGTAAACAACAACAACAACAGCAACAATCCAGCACAAGCACCACCAGCTATTGATGGCCATTCTGGAACTGCAGTGTTTGCACAATTCAGTGATCTTAATGGCAGGTGA 2526 0.4307 MVILLAILFLAFFSSHAYSAGPVSSFTPKDNFLIDCGAENPPTLPDGRQFKSDPQANSFLQANDDYKVSDGGNHELPSPIYKTARIFIQEAKYSFHLVQPGYHWIRLHFYPVKNNVFDLHKATFSVHTNVYVLLHSFNVNNTDKPILKEYLINANESQFTLIFTPLKNSAAFINAIEVVSAPDNLIFDTGAALFPVGDISGLTSYGMQPVYRLNNGGPLITSSNDTLGRTWENDEPFLTNKNLAKSVSVATNAIKFPTDTPTISPLVAPQSVYASATEMGDAGVNQPNFNVTWKFDVDISFSYLVRLHFCDIVSKGLNELYFNVYVNGKMAISNLDLSAITGALSTPYYKDIVVNATLMSEGLIVQVGPAKAEGGNANAIVNGIEVMKLSNSVDSLDGEFGVDGRKAGGSNRGTVAAAGFAMMFGAFVGLGAMVVKWHRRPQDWQKRNSFSSWLLPLHAGDTSFTGSKSNMYSSTMGLGRYFSFAELQEATKNFDSKAIIGVGGFGNVYLGVIDEGTNVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENEEMILVYEYMPNGHFRDHLYGKNLPVLSWKQRLEVCIGSARGLHYLHTGAAQGIIHRDVKTTNILLDENFTAKVSDFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPQLPREQVNLADWAMQWKRKGLLDKIIDPLLVGNINPESMKKFAEAAEKCLADYGVDRPSMGDVLWNLEYALQLQEASTEGKTEDENDIKSTHASTPSTNSDDHETPPQPLVNNNNNSNNPAQAPPAIDGHSGTAVFAQFSDLNGR 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0675 841 PANTHER OS07G0166700 PROTEIN 17 817 IPR045272 GO:0004714|GO:0006468
Lal9g0675 841 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
Lal9g0675 841 SUPERFAMILY Protein kinase-like (PK-like) 477 761 IPR011009 -
Lal9g0675 841 Gene3D Phosphorylase Kinase; domain 1 462 569 - -
Lal9g0675 841 MobiDBLite consensus disorder prediction 772 829 - -
Lal9g0675 841 Gene3D - 31 182 - -
Lal9g0675 841 Gene3D - 207 391 - -
Lal9g0675 841 Pfam Malectin-like domain 34 388 IPR024788 -
Lal9g0675 841 Pfam Protein tyrosine and serine/threonine kinase 498 690 IPR001245 GO:0004672|GO:0006468
Lal9g0675 841 PANTHER BNAC03G60370D PROTEIN 17 817 - -
Lal9g0675 841 Gene3D Transferase(Phosphotransferase) domain 1 570 792 - -
Lal9g0675 841 ProSiteProfiles Protein kinase domain profile. 494 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0675 841 ProSitePatterns Protein kinases ATP-binding region signature. 500 522 IPR017441 GO:0005524
Lal9g0675 841 SMART serkin_6 494 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0675 841 CDD STKc_IRAK 500 764 - -
Lal9g0675 841 MobiDBLite consensus disorder prediction 787 820 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0675 Lal-Chr9 4647441 4649966 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lal9g0675 Malectin_like 1.5e-39 CL0202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0675 9 4647441 4649966 Lal9g0675 9 4647441 4649966 ECH
Lal1g0707 1 4721868 4724462 Lal9g0675 9 4647441 4649966 LSH
Lal2g0770 2 4941843 4945481 Lal9g0675 9 4647441 4649966 LSH