Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0674 ATGGGTGCTGCTTGTTGCGTTGCAGCCAAAGATAAATCTGTACAACCTGGATCTACCTATGATGTCTTACATCGGAACATTCGCTGTTCTCCAACATGGAGCTTCCGGTGGGATCATCGAGGCCGTGTAGCTGGTGAAGATGCTCCTATAACTTGGTTTTCTGATGGTATCGGCAGGAATTATGGATCAGAGAACAAAAATGACTCATCATATGTATCAGAGGATGGAAGCCCATTCGAAAGTGATCAAAGGAAACGATGCCAAAAATACCCAATTTCTGAAGGAAGTGCTGGACTTGTAATAAATTCTACTTCAGCCATTAGCAACTACAGGCTGCTATGGGCTGTGACTCCCACGGAAAATGCGGCTCTGATGCCCCCTCAGCGTGCCGTAATGGAGAGCCTATCAATCTATTTCTACGAATGTCTCCATGGATGTGAACGTGGAACAGGTGAGGTGAAGGGGTTGGAAGAATCATCAACAGTATCATGTACATCTCCCACAAAACCGCCGTCATCATTACCTTCTACTTCGCTGTCGGCGTCTCCTCTGCCATCTCAAAGTCACCTTGCTCCCTCAAGCTCAACCCCATCAAGGTCGCCCTACCAGTCCCCAGGACACAAACTATTATGGCAAGTTTCTAACAGCCGAGTCCCAGGATGCAAATCACCAAGCAGCTTCTATGTGTCTGAAGAAAAGCCAGTGGTTCCTTCATGGAGCAATGAATTGGGTACTCACTCCCGTGGTGGATCTTCAGATGGTTGGTCTGTGCCTGGCTTTTCTGAGCTGATGGGAACTTCTTGTAGAGAGAGATTGTCGTTTGATAATGAATCATTTGGTTTTAACCCTGAAAGGTTACTTAGATCAAGTAATTGGTTTTCAACATCTCCGGTTGATTTCCAAACATGTGGTGTTTGCTCAAAGCTTTTAACTGAGAAGTCTTCTTGGAGCTCCCAAAAGATAATTGCAAGTAATGACCTTGCTGTAGTTTCTGTTCTTATTTGTGGCCATGTCTATCATGCTGAATGTTTGGAGAGTATGACACCTGAAATCAACAAGTATGATCCAGCTTGTCCAGTTTGCACTTATGGTGAGAAAGAAACTCTGAAGTTGTCTGAAAAAGCTCTGAAAGCTGAAATGGATTTAAAGGCTAGAAACAAGAAATCAAAGAACCGAATTGTGGACAGTGAAATAGATGATTTTGTTTTTGATCGCTTTAAAGATGGAGGGCGTCAAGGTAAGGGTCCTAAAATGGATTCTAGTTCCAGTGGGAGAAGATTCTTTGTTAAACCATTTCTGAGGAGACACTTCTCATTTGGCTCAAACAGTTCCAAATCCATGTTACATAATCACCCTACAAGAAAGAAGGGATTCTTTTGGGGGAAATCTAGCAAGCAATAA 1401 0.4347 MGAACCVAAKDKSVQPGSTYDVLHRNIRCSPTWSFRWDHRGRVAGEDAPITWFSDGIGRNYGSENKNDSSYVSEDGSPFESDQRKRCQKYPISEGSAGLVINSTSAISNYRLLWAVTPTENAALMPPQRAVMESLSIYFYECLHGCERGTGEVKGLEESSTVSCTSPTKPPSSLPSTSLSASPLPSQSHLAPSSSTPSRSPYQSPGHKLLWQVSNSRVPGCKSPSSFYVSEEKPVVPSWSNELGTHSRGGSSDGWSVPGFSELMGTSCRERLSFDNESFGFNPERLLRSSNWFSTSPVDFQTCGVCSKLLTEKSSWSSQKIIASNDLAVVSVLICGHVYHAECLESMTPEINKYDPACPVCTYGEKETLKLSEKALKAEMDLKARNKKSKNRIVDSEIDDFVFDRFKDGGRQGKGPKMDSSSSGRRFFVKPFLRRHFSFGSNSSKSMLHNHPTRKKGFFWGKSSKQ 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0674 466 ProSiteProfiles Zinc finger RING-type profile. 303 362 IPR001841 -
Lal9g0674 466 PANTHER EXPRESSED PROTEIN 1 461 - -
Lal9g0674 466 MobiDBLite consensus disorder prediction 161 206 - -
Lal9g0674 466 PANTHER BNAA09G43140D PROTEIN 1 461 - -
Lal9g0674 466 CDD RING-H2 329 361 - -
Lal9g0674 466 SUPERFAMILY RING/U-box 302 363 - -
Lal9g0674 466 SMART ring_2 303 361 IPR001841 -
Lal9g0674 466 MobiDBLite consensus disorder prediction 64 83 - -
Lal9g0674 466 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 284 363 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0674 Lal-Chr9 4640118 4646138 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0674 9 4640118 4646138 Lal9g0674 9 4640118 4646138 ECH
Lal1g0706 1 4715413 4720578 Lal9g0674 9 4640118 4646138 LSH
Lal2g0769 2 4935400 4941389 Lal9g0674 9 4640118 4646138 LSH