Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0668 ATGCTGGAAATGTCTATACAATATGAAAACTCTGATATTAAGGGTGGATCAGATCCACAAAAAAGGTTAACAATTCTGATGCATCAAGATGGGAACAACTTTTGTGCTGATTGTGGAACTCCTGAGCCAAGATGGGTATCTTCAAGTTTTGGAGTATTTATATGCATCAAGTGTTCTGGTATACATAGAAGCTTAGGAGCCCACATATCGAAGGTTCTATCACTGAAGCTAGATGAGTGGACAGATGAACAAGTTGATGCATTGGCAAAGTTGGGAGGAAATAGAATACTAAATAAGAAGTATGAAGCTTGCCTCCCAAGTTACATAAATAAACCAAAACCATATTCCTCCATTGAGGAACGATCGGATTTTATTAGGAGAAAATATGAGCTGCTACAATTTCATGAGTGTGATGAACATTCGCTACGCCCAATTGTACCATATCAAGGAAGAAGTTCACCATTCGCTCAGAGCAGTTCTTCATGCAACAATTATCATGCTGATAAGAAACCATATGACAAACAACCAAACAAACATCGTATCGGGAATGCATTCCGTAATAGCTGGGGAAGAAAAGATTCTGAGCACAAGTCTTCTTCAAAGAAGAGCACCTCATTGGCAGGTATGGTTGAGTTTGTTGGGTTGATAAAGGTTAATGTTGTTAAAGGCACTAACCTTGCGGTCCGGGATGTAATGACTAGTGACCCTTATGTCATTCTTTCTTTGGGTCACCAATCAGTGAAAACACGCGTCATAAAGAACAATTTGAATCCAGTTTGGAATGAGAGCCTAATGTTGTCTATTCCAGAGAACATTCCTCCTCTTAAAGTGCTTGTGTATGATAAGGATACATTTTCAACTGATGATTACATGGGTGAGGCTGAAATAGATATTCAACCTCTGGTTTTAGCTGCAAAAGCCTATGAGAAATCTACAATCAATGAATCCATGCAGCTAGGAAAATGTGTAGCAAGCAAGGACAATACTCTTGTTAGAGATGGTGTAATCTCCCTTGATGAAGGGAAGATCAAACAAGAAATTTCAGTGAAGCTACAGCATGTTGAAAGAGGTGTTCTTGAGGTTGAGTTGGAGTGTGTTCCTCTTACTCAGTAG 1113 0.3917 MLEMSIQYENSDIKGGSDPQKRLTILMHQDGNNFCADCGTPEPRWVSSSFGVFICIKCSGIHRSLGAHISKVLSLKLDEWTDEQVDALAKLGGNRILNKKYEACLPSYINKPKPYSSIEERSDFIRRKYELLQFHECDEHSLRPIVPYQGRSSPFAQSSSSCNNYHADKKPYDKQPNKHRIGNAFRNSWGRKDSEHKSSSKKSTSLAGMVEFVGLIKVNVVKGTNLAVRDVMTSDPYVILSLGHQSVKTRVIKNNLNPVWNESLMLSIPENIPPLKVLVYDKDTFSTDDYMGEAEIDIQPLVLAAKAYEKSTINESMQLGKCVASKDNTLVRDGVISLDEGKIKQEISVKLQHVERGVLEVELECVPLTQ 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0668 370 Gene3D Arf GTPase activating protein 5 141 IPR038508 -
Lal9g0668 370 SMART arf_gap_3 20 142 IPR001164 GO:0005096
Lal9g0668 370 Gene3D C2 domain 213 369 IPR035892 -
Lal9g0668 370 SMART C2_3c 215 310 IPR000008 -
Lal9g0668 370 CDD C2_ArfGAP 213 357 - -
Lal9g0668 370 PANTHER CALCIUM-DEPENDENT ARF-TYPE GTPASE ACTIVATING FAMILY PROTEIN 17 370 - -
Lal9g0668 370 SUPERFAMILY ArfGap/RecO-like zinc finger 20 135 IPR037278 -
Lal9g0668 370 ProSiteProfiles C2 domain profile. 197 312 IPR000008 -
Lal9g0668 370 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 17 370 IPR044518 GO:0005096|GO:0005543
Lal9g0668 370 PRINTS HIV Rev interacting protein signature 32 51 IPR001164 GO:0005096
Lal9g0668 370 PRINTS HIV Rev interacting protein signature 51 68 IPR001164 GO:0005096
Lal9g0668 370 PRINTS HIV Rev interacting protein signature 72 93 IPR001164 GO:0005096
Lal9g0668 370 Pfam C2 domain 215 302 IPR000008 -
Lal9g0668 370 Pfam Putative GTPase activating protein for Arf 21 135 IPR001164 GO:0005096
Lal9g0668 370 MobiDBLite consensus disorder prediction 169 202 - -
Lal9g0668 370 ProSiteProfiles ARF GTPase-activating proteins domain profile. 20 142 IPR001164 GO:0005096
Lal9g0668 370 CDD ArfGap 23 129 - -
Lal9g0668 370 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 211 305 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0668 Lal-Chr9 4600975 4604046 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0760 2 4874547 4878673 Lal9g0668 9 4600975 4604046 LSH
Lal20g0785 20 8466993 8475940 Lal9g0668 9 4600975 4604046 PCT
Lal9g0668 9 4600975 4604046 Lal20g0785 20 8466993 8475940 PCT