Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0667 ATGATGTACGGTGATCCTCATAACCACCACCAGCAACAGCAGCAGCCGCCACAGCATTTTCAGCACCACCACCAGCCAGGTCCAGAATTTCACCGTGGACCACCGCCGCCGCCGCAGATGATGCGCCAACCTTCTGCTTCGTCCATTAACATAGCTCCAGAGTTTCACCACCCCGCTCCCGGTGGCCACCCTCCTCCTCATTACGATGTTCACGGTGATAGCCATGGTGCAAAAAGAATAAGAAAGCTTGCTCAAAGAAGGGCGGTTGATTATACCAGCACAGTTGTGCGTTATATGCAGATTCGTATGTGCCAGTGTGATTCAAGGGATAGGACAGTACTCCAACCTACCCCAGCAGCAGCAACTGATATGTTGCCGGCAGTTGGCTATTCAGACAATCCATCTACAAGCTTTGCTACTAAATTTGTTCATACATCTGTAAATAAAAATCGCTGCCCTATTAATCGTGTTCTTTGGACTCCAACAGGACGGCGTCTAATTACTGGCTCACAGACTGGGGAATTCACTCTTTGGAATGGACAATCTTTTAATTTCGAAATGATTCTTCAGGCACATGACCAAGCAATTAGATCCATGGTCTGGAGTCACAATGACAACTGGATGGTCTCTGGTGATGATGGAGGCGCAATAAAGTATTGGCAGAACAACATGAATAATGTTAAAGCCAACAAATCTGCTCACAAAGAATCAGTCCGTGACTTAAGGACAGATTTGAAGTTTTGTTCATGCTCTGATGATACCACTGTTAAAGTTTGGGATTTTGCACGCTGTCAAGAAGAATCTTCATTAACTGGTAATACAGGCCATGGTTGGGATGTTAAGAGTGTTGACTGGCATCCTACAAAATCCCTATTAGTATCAGGTGGGAAGGACAATCTTGTGAAACTTTGGGATGCTAAATCAGGCAAAGAACTTTGCTCATTTCATGGGCATAAAAATACTGTGCTATGTGTCAAGTGGAATCAAAATGGCAACTGGGTGTTAACAGCATCAAAGGATCAAATAGTAAAGCTTTATGACATAAGGGCTATGAAGGAGCTTGAATCATTCCGTGGACATCGCAAGGATGTTACTGCTTTGGCTTGGCATCCATTTCATGAAGAGTACTTTGTCAGTGGGAGTCATGATGGTTCCATCTTCCATTGGCTTGTGGGACATGAAACTCCGCAAATTGAAGTTACTGGTGCTCATGATAATAATGTGTGGGACCTTGCATGGCATCCTATTGGGTACCTTCTCTGCAGTGGTAGCAGTGATCATACGACAAAGTTTTGGTGCAGAAATAGGCCAGGAGACACTGCTCGTGATAGATTTAACAATGGCATGCAAGGATATGCTGAGCAAAATCCCGCTGCTGGTCGTGTGGCTGGTAACTTTGCAATGCCTGAAGTCCCAACAACTCCAGGACCATTTCCCCCTGGGTTGTCTCGAAATGAAGGCACCATTCCAGGTGTTGGAGTTGCAATGCCTTTACTTGATGTGCCTCAGGGGGAGCAGATGCAGCCCCATCCTGCTTCAATGGGTGCTCCTCCTCTTCCACCAGGTCCACATCCCTCTCTTCTTACTGCTAATCAACAGAGACCATACCAGCAGAATTCTCAGCAGATTCCACAACATCAACACCAGGGATTACCACAACAGATGGGTCCTTTGCCTTTGCCCCCAATGCCACAGCTACAGAACCCTTCTCAGTCATCCATGGTCCCTCATCCGCATTTGCCCCGCCCTCCACACCAATTGCCACTTGGAATGCCAGGTCCTACGTCACATCAGATGCCAATGCCAGGTCCAATGGGGATGCAAGGTGGAATGAATCAAATGGGTCCTCCAATGCCACAAGGACATTATGGGGGCATGAATCAAATGCATTCAGGACCCTTGCCTCCGAGTGGAGGGCCGCCTGTTGGAGTTTTTCCAGGCAACTTGTCTAATATGCAAGGGCCACCAAATACCAGTTATCCTCAAGGAGCATTCAACCGACCTCAAGGTGGACAGATCCCTTTGATGCAAGGGTATAATCCTTACCAGTCTGGAAATCAATCTGGGATGCCTCCAAATGCACAACCAGGGGCACCACACTCTCAAATGCCTCAATAG 2118 0.4717 MMYGDPHNHHQQQQQPPQHFQHHHQPGPEFHRGPPPPPQMMRQPSASSINIAPEFHHPAPGGHPPPHYDVHGDSHGAKRIRKLAQRRAVDYTSTVVRYMQIRMCQCDSRDRTVLQPTPAAATDMLPAVGYSDNPSTSFATKFVHTSVNKNRCPINRVLWTPTGRRLITGSQTGEFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLRTDLKFCSCSDDTTVKVWDFARCQEESSLTGNTGHGWDVKSVDWHPTKSLLVSGGKDNLVKLWDAKSGKELCSFHGHKNTVLCVKWNQNGNWVLTASKDQIVKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSHDGSIFHWLVGHETPQIEVTGAHDNNVWDLAWHPIGYLLCSGSSDHTTKFWCRNRPGDTARDRFNNGMQGYAEQNPAAGRVAGNFAMPEVPTTPGPFPPGLSRNEGTIPGVGVAMPLLDVPQGEQMQPHPASMGAPPLPPGPHPSLLTANQQRPYQQNSQQIPQHQHQGLPQQMGPLPLPPMPQLQNPSQSSMVPHPHLPRPPHQLPLGMPGPTSHQMPMPGPMGMQGGMNQMGPPMPQGHYGGMNQMHSGPLPPSGGPPVGVFPGNLSNMQGPPNTSYPQGAFNRPQGGQIPLMQGYNPYQSGNQSGMPPNAQPGAPHSQMPQ 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0667 705 ProSiteProfiles Trp-Asp (WD) repeats profile. 189 221 IPR001680 GO:0005515
Lal9g0667 705 MobiDBLite consensus disorder prediction 503 586 - -
Lal9g0667 705 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 357 389 - -
Lal9g0667 705 MobiDBLite consensus disorder prediction 526 552 - -
Lal9g0667 705 Gene3D - 270 318 IPR015943 GO:0005515
Lal9g0667 705 MobiDBLite consensus disorder prediction 676 705 - -
Lal9g0667 705 SMART WD40_4 182 221 IPR001680 GO:0005515
Lal9g0667 705 SMART WD40_4 308 347 IPR001680 GO:0005515
Lal9g0667 705 SMART WD40_4 393 433 IPR001680 GO:0005515
Lal9g0667 705 SMART WD40_4 135 179 IPR001680 GO:0005515
Lal9g0667 705 SMART WD40_4 263 305 IPR001680 GO:0005515
Lal9g0667 705 SMART WD40_4 350 390 IPR001680 GO:0005515
Lal9g0667 705 SMART WD40_4 224 260 IPR001680 GO:0005515
Lal9g0667 705 MobiDBLite consensus disorder prediction 1 77 - -
Lal9g0667 705 ProSiteProfiles Trp-Asp (WD) repeats profile. 147 179 IPR001680 GO:0005515
Lal9g0667 705 ProSiteProfiles Trp-Asp (WD) repeats profile. 401 432 IPR001680 GO:0005515
Lal9g0667 705 MobiDBLite consensus disorder prediction 7 21 - -
Lal9g0667 705 ProSiteProfiles Trp-Asp (WD) repeats profile. 315 356 IPR001680 GO:0005515
Lal9g0667 705 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 189 221 - -
Lal9g0667 705 Pfam WD domain, G-beta repeat 353 389 IPR001680 GO:0005515
Lal9g0667 705 Pfam WD domain, G-beta repeat 274 305 IPR001680 GO:0005515
Lal9g0667 705 Pfam WD domain, G-beta repeat 187 220 IPR001680 GO:0005515
Lal9g0667 705 Pfam WD domain, G-beta repeat 232 260 IPR001680 GO:0005515
Lal9g0667 705 Pfam WD domain, G-beta repeat 309 347 IPR001680 GO:0005515
Lal9g0667 705 Pfam WD domain, G-beta repeat 402 432 IPR001680 GO:0005515
Lal9g0667 705 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 401 432 - -
Lal9g0667 705 MobiDBLite consensus disorder prediction 661 705 - -
Lal9g0667 705 SUPERFAMILY WD40 repeat-like 144 432 IPR036322 GO:0005515
Lal9g0667 705 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 315 349 - -
Lal9g0667 705 ProSiteProfiles Trp-Asp (WD) repeats profile. 273 314 IPR001680 GO:0005515
Lal9g0667 705 Gene3D - 126 269 IPR015943 GO:0005515
Lal9g0667 705 PRINTS G protein beta WD-40 repeat signature 247 261 IPR020472 -
Lal9g0667 705 PRINTS G protein beta WD-40 repeat signature 292 306 IPR020472 -
Lal9g0667 705 PRINTS G protein beta WD-40 repeat signature 420 434 IPR020472 -
Lal9g0667 705 PANTHER WD40 REPEAT PROTEIN 11 698 IPR045245 GO:0031124
Lal9g0667 705 CDD WD40 151 432 - -
Lal9g0667 705 Gene3D - 319 465 IPR015943 GO:0005515
Lal9g0667 705 ProSitePatterns Trp-Asp (WD) repeats signature. 292 306 IPR019775 -
Lal9g0667 705 ProSiteProfiles Trp-Asp (WD) repeats profile. 357 389 IPR001680 GO:0005515
Lal9g0667 705 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 273 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0667 Lal-Chr9 4587204 4596648 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0689 1 4521431 4530801 Lal9g0667 9 4587204 4596648 LSH