Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0666 ATGGCTATAGATGCAGATGCCCAGTTCCATGTTTTGGCTGTTGATGACAGTCTTATAGACAGAATGTTGATTGAGAGGCTCCTTAAAACCTCTTCCTTTCATGTTACTGCAGTGGACTCTGCCACTAAGGCTTTGAAATTTCTTGGTTTGGTTGAAGATGATCTCAGAACTTTTGACACTCCTTCTGTAGCTTCAAAATTTCATCAGGATGTAGAAGTACACCTGATCATAACAGATTACTGTATGCCAGGAATGACTGGCTATGATCTGCTGAGAAAAATCAAGGAATCTAAATCTCTTAAAGACATACCAGTTGTGATTATGTCCTCAGAGAATGTTCCATCAAGGATCAACAGATGTTTGGAAGAGGGGGCTGAAGAATTCTTTCTGAAACCAGTTCAACAATCAGATGTAAACAAGCTCAAGCCCCATTTGTTGAAATGA 444 0.3964 MAIDADAQFHVLAVDDSLIDRMLIERLLKTSSFHVTAVDSATKALKFLGLVEDDLRTFDTPSVASKFHQDVEVHLIITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQQSDVNKLKPHLLK 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0666 147 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 147 IPR045279 GO:0009736
Lal9g0666 147 SUPERFAMILY CheY-like 9 138 IPR011006 -
Lal9g0666 147 SMART REC_2 9 145 IPR001789 GO:0000160
Lal9g0666 147 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Lal9g0666 147 CDD REC_typeA_ARR 11 141 - -
Lal9g0666 147 Pfam Response regulator receiver domain 11 138 IPR001789 GO:0000160
Lal9g0666 147 PANTHER RESPONSE REGULATOR ARR8, PUTATIVE-RELATED 3 147 - -
Lal9g0666 147 Gene3D - 10 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0666 Lal-Chr9 4582458 4586237 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal9g0666 Response_reg 3.6e-19 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0688 1 4518268 4520407 Lal9g0666 9 4582458 4586237 LSH
Lal2g0756 2 4853836 4857293 Lal9g0666 9 4582458 4586237 LSH
Lal9g0666 9 4582458 4586237 Lal20g0658 20 6121626 6125354 PCT
Lal9g0666 9 4582458 4586237 Lal1g1503 1 17122701 17126444 PCT