Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0656 ATGGCCGGAAACTGCTTACCGGAGGTTCAGGTAACCGGAAGCGGCCGTCCTGTTCTTCTTCCGAACGAGATCGAGTGTTTCTTTCTCTCCTCCGTTGACCTTCTCTGCGAAGACACTGAACCCAACGCCATTTCCTTCCCTCATCTCAAATCGGGCATCCTCATCCTCACCACCCACCGTCTCCTCTGGCTCTCCGATTCACCCTCCGCCGTTGCATTCGCAATCCCCCTCGCCGTGATTTCCCACATCTTCTCCCATAAAAAGTCCCTCAAGTCAATGTTCACTTCCCCGAGGGTCCGCTTCCAGGTGTCGCTGTCGCCGGAAGGTAGGGTTTCGGCATCGGGTTCGAGCTCGGTGGTGGTGACGATCGTGGTGAGAGGGAAATGGGACTACGACGCGTTTTTGGCTAAGTTTTGGGAAAATTGGCGGGGCAGGGCGTGGGAAGAAGCGGCGAGTGTTTCGAGTTCGGGTTCAAATGTTGCGGTCGCGGCGTCTCCAAGTGGTATTTATTCGAGTGATGGGACGGTGAGGATGGTGGGAGTGTCAGGGATATTGAGGAAGGAACAGGAAATGTGGGAGAGTACTGATAAGAGCTTGAATGAGGCTTTTCAGGATTTGAATGCTCTTATGAGTAAGGCAAAAGAGATGGTGATGTTAGCAGAGAAAATGAGGCTAAAACTTCTGTCTGGCTCAAGTTCTCAATCTACTACAACTGGTGATGAGGAGATGGGTTCAAAGGAAGAGATGCAAGAATTGTTATTGAGTGTTGGTATAATATCCCCTGTCACCAAAGAGTCTGCTGGTGCTTTGTATCATCAACAGTTATCTCGCCAGTTGGCAGATTTTGTCAAAGTTCCACTTGAGAGAGCTGGAGGAATTATCAATCTAATTGATGTTTATTGTCTATTCAATCGTGCTCGCGGCACAGAATTGATTTCACCTGATGATTTGTTGCAAGCATGTTCTCTGTGGGAGAAGTTTGATGTTTCATTGGTTCTGCGTAAGTTTGATAGTGGAGTCATGGTAATACAGACCAAGTCCCACAGTGATGAAGAGGTTATCGCTAAAATCAAGATGCTTGTTATGAAACCTGATGCTCTTCGACATGGGATAAGTGCTAGTGATGCTGCAAGAACACTGGGAGTTGCCCCAGCAATGGCAAAGGAGCATCTCTTGTCTGCTGAGATCAAGGGTGTACTATGCAGAGATATAAGCCCTGATGGATTTCGATTTTATATTAACTTGTTCCTTGAATTTGATCGAGATGACATGTATTTAGTGAAAGATCAAGGTCTTTATGCCTCATGGGTAAGGGCAAACCATGCTCGTGGGTAA 1335 0.4749 MAGNCLPEVQVTGSGRPVLLPNEIECFFLSSVDLLCEDTEPNAISFPHLKSGILILTTHRLLWLSDSPSAVAFAIPLAVISHIFSHKKSLKSMFTSPRVRFQVSLSPEGRVSASGSSSVVVTIVVRGKWDYDAFLAKFWENWRGRAWEEAASVSSSGSNVAVAASPSGIYSSDGTVRMVGVSGILRKEQEMWESTDKSLNEAFQDLNALMSKAKEMVMLAEKMRLKLLSGSSSQSTTTGDEEMGSKEEMQELLLSVGIISPVTKESAGALYHQQLSRQLADFVKVPLERAGGIINLIDVYCLFNRARGTELISPDDLLQACSLWEKFDVSLVLRKFDSGVMVIQTKSHSDEEVIAKIKMLVMKPDALRHGISASDAARTLGVAPAMAKEHLLSAEIKGVLCRDISPDGFRFYINLFLEFDRDDMYLVKDQGLYASWVRANHARG 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0656 444 ProSiteProfiles GLUE domain profile. 9 117 IPR021648 GO:0032266|GO:0043130
Lal9g0656 444 SUPERFAMILY PH domain-like 6 124 - -
Lal9g0656 444 Gene3D - 10 154 IPR011993 -
Lal9g0656 444 Gene3D - 270 346 IPR036388 -
Lal9g0656 444 SUPERFAMILY "Winged helix" DNA-binding domain 307 419 IPR036390 -
Lal9g0656 444 Pfam Vacuolar protein sorting protein 36 Vps36 11 103 IPR021648 GO:0032266|GO:0043130
Lal9g0656 444 PANTHER VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 36 7 423 IPR037855 GO:0000814|GO:0032509|GO:0043130
Lal9g0656 444 Pfam EAP30/Vps36 family 179 403 IPR040608 -
Lal9g0656 444 Gene3D - 194 268 - -
Lal9g0656 444 Gene3D - 347 418 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0656 Lal-Chr9 4515360 4519996 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0656 9 4515360 4519996 Lal9g0656 9 4515360 4519996 ECH
Lal2g0726 2 4541172 4550617 Lal9g0656 9 4515360 4519996 LSH