Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0650 ATGAAACATGATGAAACTAGAAGACTCTCAGATGAATATGAGGTTTCAAATATCCTAGGAAGAGGTGGGTTTTCTGTTGTGAGAAAAGGCACAAAAAAATCAAGTAGTGAGAAAATCCATGTAGCCATCAAAACACTGAGGAGGGTAGGTACTACTTCAAACAACCCTTCTGGAACACCAAGAACAAAAGTTGGTGGTGGTGATGAAGGAGGAGAAAAGAGCATAGCAGCATCTATAATGGGGTTCACAACATTGAGACAAGTCTCAGTCTCAGATGCATTACTCACCAATGAGATCCTTGTCATGAGGAAGATAGTGGAAAATGTTTCACCACATCCAAATGTGATTGACCTCTATGATGTATATGAGGACTCAAATGGTGTTCACCTTGTGCTGGAGCTGTGTTCTGGTGGAGAATTGTTTGATAGGATTGTGGCACAAGATCGGTACACCGAGACCGAGGCCGCAGCCGTGGTTCGCCAGATTGCAGCAGGGCTAGAGGCTATTCATAAAGTTAACATTATCCATAGGGACTTGAAGCCAGAAAATTGTCTTTTTTTGGATGTTAAGAAGGATTCTCCTCTCAAAATTATGGATTTTGGGTTGAGTTCTGTTGAAGAGTTTACTGACCCTGTTGTTGGTTTGTTTGGATCTATAGACTATGTTTCACCTGAGGCTCTTTCTCAAGGGAAGATAACTACCAAAAGTGATATGTGGTCTCTAGGAGTTATTCTATATATCTTGCTCTCTGGGTATCCTCCTTTCATTGCTCAGACCAATCGCCAAAAACAACAAATGATAATGAATGGGAATTTCAGTTTCTATGAGAAGACATGGAAGGGCATAACTCAAGCAGCCAAGCAATTGATTTCAAGTCTTCTGAGTGTTGATCCTAGTAGGAGACCTAGTGCTCAACAGCTTCTGAATCATCCATGGATCAGAGGTGACATAGCCAAAGATGATCAAATGGACCCTGAGATTGTCTCAAGGTTGCAGACTTTTAATGCTCGGCGCAAACTCCGTGTAGCCGCAATTGCAAGTGTTTGGAGCACCACAATGTTCTTGAGAACCAAAAAACTGAAATCATTGATAGGATCCTATGACCTCAAAGAAGAAGAAATTGAAAACCTCAGGATACATTTCAAGAAGATATGTGCAAATGGAGACAATGCCACTCTGTCTGAGTTTGAAGAGGTGCTGAAGGCGATGAATATGGCATCTCTGATCCCTCTAGCACCACGTATATTCGACTTGTTTGACAACAACCGTGACGGAACGGTTGACATGCGTGAGATACTATGTGGATTCTCCAGCCTCAAAAATTCAAAAGGAGATGATGCTCTTCGTTTGTGCTTCCAGCTTATACAACACAGGAAAAAAGCTGAACAAGATAAGCTAATTTGCCTCTATGGTTTTCTTGGGAAACAGATGTATGACACAGATCGATCCGGGTGCATCACAAAGGAAGAAGTAGCATCCATGCTCAGAGCTTTGCCAGAGCACTTTCTTCCAGCTGATATAACTGAACCTGGCAAATTGGATGAGATATTTGACATAATGGATGCTAACAGTGATGGAAAAGTTACCTTTGATGAATTCAAAGCTGCTATGCTCAGAGATAGCTCTCTCCAAGATGTAGTTCTCTCTTCACTTCGCCCACTATAG 1665 0.418 MKHDETRRLSDEYEVSNILGRGGFSVVRKGTKKSSSEKIHVAIKTLRRVGTTSNNPSGTPRTKVGGGDEGGEKSIAASIMGFTTLRQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDSNGVHLVLELCSGGELFDRIVAQDRYTETEAAAVVRQIAAGLEAIHKVNIIHRDLKPENCLFLDVKKDSPLKIMDFGLSSVEEFTDPVVGLFGSIDYVSPEALSQGKITTKSDMWSLGVILYILLSGYPPFIAQTNRQKQQMIMNGNFSFYEKTWKGITQAAKQLISSLLSVDPSRRPSAQQLLNHPWIRGDIAKDDQMDPEIVSRLQTFNARRKLRVAAIASVWSTTMFLRTKKLKSLIGSYDLKEEEIENLRIHFKKICANGDNATLSEFEEVLKAMNMASLIPLAPRIFDLFDNNRDGTVDMREILCGFSSLKNSKGDDALRLCFQLIQHRKKAEQDKLICLYGFLGKQMYDTDRSGCITKEEVASMLRALPEHFLPADITEPGKLDEIFDIMDANSDGKVTFDEFKAAMLRDSSLQDVVLSSLRPL 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0650 554 ProSiteProfiles Protein kinase domain profile. 13 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0650 554 SUPERFAMILY EF-hand 357 544 IPR011992 -
Lal9g0650 554 Gene3D Transferase(Phosphotransferase) domain 1 140 335 - -
Lal9g0650 554 SMART serkin_6 13 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0650 554 Gene3D Phosphorylase Kinase; domain 1 1 63 - -
Lal9g0650 554 Gene3D - 336 548 - -
Lal9g0650 554 Pfam EF hand 416 431 IPR002048 GO:0005509
Lal9g0650 554 SMART efh_1 476 498 IPR002048 GO:0005509
Lal9g0650 554 SMART efh_1 411 439 IPR002048 GO:0005509
Lal9g0650 554 SMART efh_1 512 540 IPR002048 GO:0005509
Lal9g0650 554 MobiDBLite consensus disorder prediction 47 70 - -
Lal9g0650 554 CDD STKc_CAMK 13 312 - -
Lal9g0650 554 ProSiteProfiles EF-hand calcium-binding domain profile. 508 543 IPR002048 GO:0005509
Lal9g0650 554 Pfam Protein kinase domain 103 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0650 554 PANTHER SERINE/THREONINE-PROTEIN KINASE 4 537 - -
Lal9g0650 554 PANTHER CALCIUM AND CALCIUM/CALMODULIN-DEPENDENT SERINE/THREONINE-PROTEIN KINASE 4 537 - -
Lal9g0650 554 Gene3D Phosphorylase Kinase; domain 1 69 139 - -
Lal9g0650 554 SUPERFAMILY Protein kinase-like (PK-like) 5 338 IPR011009 -
Lal9g0650 554 ProSiteProfiles EF-hand calcium-binding domain profile. 407 442 IPR002048 GO:0005509
Lal9g0650 554 ProSitePatterns EF-hand calcium-binding domain. 479 491 IPR018247 -
Lal9g0650 554 ProSitePatterns Protein kinases ATP-binding region signature. 19 44 IPR017441 GO:0005524
Lal9g0650 554 CDD EFh 477 537 IPR002048 GO:0005509
Lal9g0650 554 Pfam EF-hand domain pair 476 537 IPR002048 GO:0005509
Lal9g0650 554 MobiDBLite consensus disorder prediction 47 61 - -
Lal9g0650 554 ProSitePatterns EF-hand calcium-binding domain. 420 432 IPR018247 -
Lal9g0650 554 ProSitePatterns EF-hand calcium-binding domain. 521 533 IPR018247 -
Lal9g0650 554 ProSiteProfiles EF-hand calcium-binding domain profile. 476 501 IPR002048 GO:0005509
Lal9g0650 554 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0650 Lal-Chr9 4474766 4479364 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0650 94 541 EF-hand Containing Proteins AT3G10660 35.870 1.30e-75 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMK1-DCAMKL Lal9g0650 Pkinase 5e-57 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0650 9 4474766 4479364 Lal9g0650 9 4474766 4479364 ECH