Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0649 ATGGGGATCCAAACTGTGGGGTCTCAAGCTGGTGGTGGTGGAGATAGCAATGGAAAAAGGTCACAACTCCAGCCTCTGGCGCGACAAAGCTCAATGTACAGTCTCACACTCGACGAGGTTCAGAATCAATTAGGTGATTTAGGGAAGCCACTAACTAGTATGAATCTTGATGAGCTTCTCAAAAATGTATTGAACGTCGAGGCAAACCAGTCTACCGCTTTGGACATTGAGGGCACAACGCAAGTTAATCAAGCCGAGCTTCAGCATCAAGCTAGTCTGTCGTTAACTGATGCACTAAGCAAGAAAACGGTTGATGAGGTTTGGAGGGATATCCAACAGAGCAAAAATAGTAACAAGAAGAAGTCTCAAGAAAGACAACCTACCTTGGGAGAGATGACATTGGAGGATTTCTTGGTGAAAGCAGGTATTGTTGCAGAAGGATCGTCCAATGGAAACAATACAAGTACTATATCCGCATTCGATTCAAATGCTGCAATTCAGCAGTTTCAGCCGCAAGGTCATTGGATGCCGTATCCACAACCACAATATCAGCATCCACAACAAAGCTTAATGGGGATTTATATGCCTGGCCAGGGTATAGCACAACCATTACACATGGGGGCTGGTGCTTCAATGGATGGTGTTCCATTTGCAGATAGTCAGGTGGCATTGCCTTCACCTTTGATGGGAACAATGTCGGATACGCAGACACATGGAAGAAAAAGGAACACTCCAGAGGACATTGTGGAAAAGAGCGTCGAGAGGAGGCAAAAGAGGATGATCAAGAATCGGGAATCTGCTGCCCGTTCAAGAGCAAGGAAGCAGGCATACACAAATGAATTGGAGAATAAAGTTTCGCGTCTGGAAGAGGAAAACGAAAGGCTGAGGAAGCAAAAGGAGCTAGAGAAGATGCTGCCCTGTGCACCACCTCCCGAACCTAAATATCAACTTCGCCGAACAGCATCAGCTCCATTCTAA 978 0.4601 MGIQTVGSQAGGGGDSNGKRSQLQPLARQSSMYSLTLDEVQNQLGDLGKPLTSMNLDELLKNVLNVEANQSTALDIEGTTQVNQAELQHQASLSLTDALSKKTVDEVWRDIQQSKNSNKKKSQERQPTLGEMTLEDFLVKAGIVAEGSSNGNNTSTISAFDSNAAIQQFQPQGHWMPYPQPQYQHPQQSLMGIYMPGQGIAQPLHMGAGASMDGVPFADSQVALPSPLMGTMSDTQTHGRKRNTPEDIVEKSVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKELEKMLPCAPPPEPKYQLRRTASAPF 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0649 325 Pfam bZIP transcription factor 255 302 IPR004827 GO:0003700|GO:0006355
Lal9g0649 325 SMART brlzneu 251 319 IPR004827 GO:0003700|GO:0006355
Lal9g0649 325 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 258 273 IPR004827 GO:0003700|GO:0006355
Lal9g0649 325 Gene3D - 253 306 - -
Lal9g0649 325 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 4 323 IPR043452 GO:0003700|GO:0045893
Lal9g0649 325 MobiDBLite consensus disorder prediction 261 325 - -
Lal9g0649 325 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 253 298 IPR004827 GO:0003700|GO:0006355
Lal9g0649 325 MobiDBLite consensus disorder prediction 261 303 - -
Lal9g0649 325 SUPERFAMILY Leucine zipper domain 255 300 IPR046347 GO:0003700|GO:0006355
Lal9g0649 325 PANTHER BZIP TRANSCRIPTION FACTOR 4 323 - -
Lal9g0649 325 CDD bZIP_plant_BZIP46 255 309 - -
Lal9g0649 325 MobiDBLite consensus disorder prediction 1 27 - -
Lal9g0649 325 Coils Coil 271 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0649 Lal-Chr9 4468821 4473423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0649 24 325 bZIP Transcription Factor Family AT3G56850 55.844 3.84e-99 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal9g0649 bZIP_1 1.5e-12 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0669 1 4376654 4379867 Lal9g0649 9 4468821 4473423 LSH