Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0646 ATGTATAACAAGTGTAGATTAAAGATGAAACTCTTGGCTAACATTTTCTCTATGTTCTTTGTTACTTTTACCAGCATCCAACTTTGCATGGCAGACTGTGATAATTTACAGGACACTTGTCCTGCAATTCCACCCAAAAAGCAGACCATATTCATCAATGGCCTACCCTGCAAAAGTCAAGCTAATATAACAGCTCAAGATTTCAAGACTTCAGAATTAAGCAACACTGGCTCTACAGATATATTTGGTGCTTCCTTCAAAATGGTCACTGCTTCTGAGTTTCCTGGCCTTAACACTCTTGGCCTCTCAATTGGAAGAACTGATATGGATGGTGATGGCCTTGTAAATTTCCATTATCACCCTAGAGCTACTGAGATAATATATGTTACCAAAGGTGTATTGCTTGCTGGATTTATTGATACCAAAAACCAAGTTTTCCAAGAGTTTCTTAATGTAGGTGATGTTTTTGTGTTCCCAAAAGGGTTGTTTCACTTTATTCTTAATCATGGGTTTCAAGATGCTACTGTCATCTCAGTGTTCAATAGCCAAAACCCAGGGTTTGTATCTATCACAGCAACAACTTTTGACAACACAATGGAATCATTAGAGAAGCTAAAGAGAAGACTTGTCTCACTTTATGAAGGTCATGATGATGTTGCTAGTTTAACCATGCTAGGGTTGGAAAGCATTTTCAGTTAG 699 0.3777 MYNKCRLKMKLLANIFSMFFVTFTSIQLCMADCDNLQDTCPAIPPKKQTIFINGLPCKSQANITAQDFKTSELSNTGSTDIFGASFKMVTASEFPGLNTLGLSIGRTDMDGDGLVNFHYHPRATEIIYVTKGVLLAGFIDTKNQVFQEFLNVGDVFVFPKGLFHFILNHGFQDATVISVFNSQNPGFVSITATTFDNTMESLEKLKRRLVSLYEGHDDVASLTMLGLESIFS 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0646 232 ProSitePatterns Germin family signature. 113 126 IPR019780 GO:0030145
Lal9g0646 232 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 18 215 - -
Lal9g0646 232 CDD cupin_OxOx 32 201 - -
Lal9g0646 232 SUPERFAMILY RmlC-like cupins 49 207 IPR011051 -
Lal9g0646 232 SMART Cupin_1_3 71 203 IPR006045 -
Lal9g0646 232 Pfam Cupin 83 207 IPR006045 -
Lal9g0646 232 PRINTS Germin signature 118 138 IPR001929 GO:0030145
Lal9g0646 232 PRINTS Germin signature 148 168 IPR001929 GO:0030145
Lal9g0646 232 PRINTS Germin signature 181 196 IPR001929 GO:0030145
Lal9g0646 232 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 4 18 215 - -
Lal9g0646 232 Gene3D Jelly Rolls 31 213 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0646 Lal-Chr9 4456829 4457527 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0646 35 201 Miscellaneous Gene Families AT1G72610 37.500 9.34e-33 116