Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0642 ATGGAACAGTTTTTCAATAACTTTAGTTTCTCAAGACCAGAAAGAAATAGCAATGGGGAAATAACTGTGGAGGAACTTGAAGAGAGAATAAGGATTGATCACAATCTATTGAAGCAGCTCAAAGGAGAGAGCATAGATACTGATGAAACCAAGTTATCAGAACATAGCAAAAGGGAGATTATGTCCATTGCACAAAATGGTATATTGAAGCATATGTTGAAGATGGTGGAATTTTGTAATGCTCAAGGTTTTGTGTATGGCATAGTTTGTGAGAAAGGGAAGCCAATAATTGGAGCTTCAGATAATCTTCGCCAATGGTGGAAGGAAAAGGTTAAGTTTGATCGCAATGGTCCAGCTGCAATAGCAAAGTATGAAGCAGAAAATGGAAAAAATGTTGCAATGAATGGAGATAGTAATAATAATGCATATGATAATCATAGCTTGGAAGAACTTCAGGACACTACCCTTGGGTCACTTTTGTCAGCTCTAATGTTTAATTGTGATCCTCCACAAAGGAAGTTCCCTTTGGATAATGGTATTGCACCACCATGGTGGCCTAAAGGGAATGAAACATGGTTGCCTCAATTGGGTTTTGCTCAAGATCCAGGTCCTCCTCCTTATAAGAAGCCTCATGATTTGAGGAAGGCTTGGAAGATTGTTGTCCTCACTGGTGTGATTAAGCACATATCCCCCGATTTCGACAAGATTCGTCGAGTCGTGAGCCAATCTAAGTGCCTGCAAGATAAGATGACTAGTAAGGAGATTGCTACATGGAAGGCTATTATAAATCAAGAAGAATCCTTGGCTAGGAAGATGTATCCTGAAAGGTTCCCATCTTTTTTGCATGAAAGCAATGTTGGGCTTGCTGATAAGTTGGATGATTTTGATGTAGAATTTACTAATGATGGTGCAAATTTTCATAGTTTGGAAGAGCACAAGGAATTCCAGAATGCCAATATGGTTCAAATGGAAGCAAGTATTCCAACAAACAACATGGTTCTTAGACCAACTTCTAAGAAGAGAACAAGGCAATTAGGTGATGCTGACATTTATACATGTCATAATCTTTCAAAGCCTTACAATAATCACCAACTTGGTCTCCATGACATGTCTTCAAGGAGCAATCACTATCTAAGTCACACAAATGGAAACAACACTTTCCAAATGCCGAAGTTGCCAAATCTCCCAAATGATAATATTCTAGAACCTACAAGAAATGGTATGAATATGGTTGAGGATATAAGGTCAATCTACAATACAAGAATTCAGCAAAGCAACCCTATGGCTAGTTGGAACATGATGGCTCCAGTGAACAATAACAAACATCAGCAAAACCTTCAACTTCAGATTAACAAGAATATCTTCAGTCCAGACGTTGTTAATAATGTCTATGGAAACTCATCTTCTGAAGTAACCAGATTTTCTGCTGCTGCACCATCCATTGGTTCTGAGATGAGGCCAACTGTTTCTCAATTTGACAATGCTAGATTCAACAATCTATTTATTCCTTCTGCCATGAACCCTGGATCTAGTCAAAGTTTCTCTAAAAGGTGCAGCAATTTGGAGAATAAGCTCTCTATTCTCATGAGAGAGACCTTGGAAAGTATAACTACGTGA 1617 0.3847 MEQFFNNFSFSRPERNSNGEITVEELEERIRIDHNLLKQLKGESIDTDETKLSEHSKREIMSIAQNGILKHMLKMVEFCNAQGFVYGIVCEKGKPIIGASDNLRQWWKEKVKFDRNGPAAIAKYEAENGKNVAMNGDSNNNAYDNHSLEELQDTTLGSLLSALMFNCDPPQRKFPLDNGIAPPWWPKGNETWLPQLGFAQDPGPPPYKKPHDLRKAWKIVVLTGVIKHISPDFDKIRRVVSQSKCLQDKMTSKEIATWKAIINQEESLARKMYPERFPSFLHESNVGLADKLDDFDVEFTNDGANFHSLEEHKEFQNANMVQMEASIPTNNMVLRPTSKKRTRQLGDADIYTCHNLSKPYNNHQLGLHDMSSRSNHYLSHTNGNNTFQMPKLPNLPNDNILEPTRNGMNMVEDIRSIYNTRIQQSNPMASWNMMAPVNNNKHQQNLQLQINKNIFSPDVVNNVYGNSSSEVTRFSAAAPSIGSEMRPTVSQFDNARFNNLFIPSAMNPGSSQSFSKRCSNLENKLSILMRETLESITT 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0642 538 Coils Coil 23 43 - -
Lal9g0642 538 Pfam Ethylene insensitive 3 34 266 IPR006957 GO:0005634
Lal9g0642 538 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 16 460 IPR006957 GO:0005634
Lal9g0642 538 Gene3D - 144 276 IPR023278 GO:0003700|GO:0005634
Lal9g0642 538 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 16 460 - -
Lal9g0642 538 SUPERFAMILY DNA-binding domain of EIN3-like 146 269 IPR023278 GO:0003700|GO:0005634
Lal9g0642 538 Gene3D - 51 127 IPR023278 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0642 Lal-Chr9 4427061 4429571 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0642 17 478 EIL Transcription Factor Family AT2G27050 44.444 1.20e-122 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Lal9g0642 EIN3 4.1e-105 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0642 9 4427061 4429571 Lal9g0642 9 4427061 4429571 ECH