Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0633 ATGAGACGGATGAAGAATGAGATTGAAGATGAGATGCTCCCCAACAATATGACAGAATCACAGTTGAATGATGAGGGTAATGGAGGAAGTGACAGCGTAGTTGTTCTGAAGAAAGGTCCATGGACATCTTCTGAAGATGCAATTTTGGTTGATTATGTTCAGAAGCATGGGGAGGGGAACTGGAATGCTGTTCAGAAGCATACAGGCCTTTTGCGTTGCGGAAAAAGTTGCCGATTGCGGTGGGCCAATCACCTAAGGCCAAATTTAAAGAAAGGGACGTTTACTGCACAAGAGGAGCGTTTAATTAGTGAACTTCACCTAAAAATGGGAAACAAATGGGCACGCATGTCAGCGCATTTGCCTGGTCGCACAGATAATGAGATAAAGAACTACTGGAACACCCGAATCAAGAGGCGTCAACGGGCTGGTTTGCCACTTTATCCTCCTGAAGTGTGTTCGCAAGCATTCCAAGAGAGTCATCAAAGCCAAAGCACTGGTGGAGTTAATAGTGGCAATAAAGTGCGTCATGATTTGTTGAACAGTTATGAGATACATGATGCGATAATTGACAGTATGAAGGATAACCAGGGAATCTCACCTTATGTTCCTGAGCCTCCTGATATTTCTGATTATAACAAAATGCTGAAAGGTCTTGATTCTTCTCAGTACTGTAACTTTGCATCATCATCATCACCTAACCATAAGCGTCTTCGAGAGTCAACAATGCCATTTCTTGGTTCCAGTGGTATGAGCAGAAATGTGTTTTATCCATTTGATCATATCCGGGTTAATGCCTCTGATAAGATTGCACAATCATTTGGAATGCAATCACCCCTTGATCATGGCCCCTCCTTACACAGCTCAATGTGTTACAGCCATTCACTTTCAAATGGCAATTCCTCTACTTCTAAGCCAACTTCTGAGGCTGTGAAGCTAGAGCTCCCTTCACTCCAATATCCAGAAATTGATTTCGGTAGCTGGGGTACATCTCCCCCACTTCCTTTGCTTGATTCGGTTGATGATTTCGTTAAGTATCCTACACCAATTAGTACAATGGAGTCAGATTGTTCTTCCCCACAGAATAGTGGCCTTCTGGATGCTTTAGTTTATCAGGCAAAGACTATGAGCAGTTCCAAGAAACATTATTCTGATGAGATTTCAAACTCATCTACTGCAATTCCGGGTCACAGAGCGGACAGCTCCACATTGAACATGTATGAGACAGAATGGGAAGACTATGCTGACCCTGTATCTCCATTTGGTGCAACTTCAATATTGAATGAATGCCCTGCTATTGCCAATGCAAATTCATTGGATGAAACGCCACTCGATCAGACCTTCAATGGTAACCTTGTGAAATTAGAGTCTGCTGATCAGGTTTGGACCCCAAACAGTGAAGACCAAAGCATGTCTTTGTTAAATATTACTTGGCCAGACATATTGCTTGATGAAGATTGGCTCCAGCAGGATTCTGATAATAGCAAGAACCAAACCATCAGAACTGATGCTATGTCAACCCTTTTCGGAGATGATTTAGCCACTGACTACAAGCATATGACTGATGTAGCTTCTAAGTCAAGTCAGGTATGGGGCTTTAGTTCTTGTGCACGTAACCACAGTGCCTTTTGTCTATCAGGTGTCTGA 1644 0.4282 MRRMKNEIEDEMLPNNMTESQLNDEGNGGSDSVVVLKKGPWTSSEDAILVDYVQKHGEGNWNAVQKHTGLLRCGKSCRLRWANHLRPNLKKGTFTAQEERLISELHLKMGNKWARMSAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPPEVCSQAFQESHQSQSTGGVNSGNKVRHDLLNSYEIHDAIIDSMKDNQGISPYVPEPPDISDYNKMLKGLDSSQYCNFASSSSPNHKRLRESTMPFLGSSGMSRNVFYPFDHIRVNASDKIAQSFGMQSPLDHGPSLHSSMCYSHSLSNGNSSTSKPTSEAVKLELPSLQYPEIDFGSWGTSPPLPLLDSVDDFVKYPTPISTMESDCSSPQNSGLLDALVYQAKTMSSSKKHYSDEISNSSTAIPGHRADSSTLNMYETEWEDYADPVSPFGATSILNECPAIANANSLDETPLDQTFNGNLVKLESADQVWTPNSEDQSMSLLNITWPDILLDEDWLQQDSDNSKNQTIRTDAMSTLFGDDLATDYKHMTDVASKSSQVWGFSSCARNHSAFCLSGV 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0633 547 CDD SANT 40 85 IPR001005 -
Lal9g0633 547 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 140 IPR017930 -
Lal9g0633 547 Gene3D - 93 139 - -
Lal9g0633 547 Gene3D - 37 90 - -
Lal9g0633 547 CDD SANT 93 134 IPR001005 -
Lal9g0633 547 MobiDBLite consensus disorder prediction 13 28 - -
Lal9g0633 547 SUPERFAMILY Homeodomain-like 37 132 IPR009057 -
Lal9g0633 547 ProSiteProfiles Myb-like domain profile. 36 85 IPR001005 -
Lal9g0633 547 PANTHER TRANSCRIPTION FACTOR, PUTATIVE-RELATED 1 539 - -
Lal9g0633 547 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 85 IPR017930 -
Lal9g0633 547 SMART sant 37 87 IPR001005 -
Lal9g0633 547 SMART sant 90 138 IPR001005 -
Lal9g0633 547 ProSiteProfiles Myb-like domain profile. 86 136 IPR001005 -
Lal9g0633 547 MobiDBLite consensus disorder prediction 1 32 - -
Lal9g0633 547 Pfam Myb-like DNA-binding domain 38 85 IPR001005 -
Lal9g0633 547 Pfam Myb-like DNA-binding domain 91 134 IPR001005 -
Lal9g0633 547 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 1 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0633 Lal-Chr9 4311739 4316849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0633 35 529 MYB Transcription Factor Family AT3G11440 42.389 1.02e-111 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lal9g0633 Myb_DNA-binding 1.7e-14 CL0123