Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0631 ATGAGGAAGAAGCTTGATACACGTTTCCCAGCTGCTAGGATAAAGAAGATAATGCAAGCAGATGAGGATGTTGGGAAGATAGCACTGGCTGTGCCTGTTTTAGTTTCAAAAGCACTAGAGCTATTTTTGCAAGATCTTTGTGACCGTACTTATGAAATAACTCTTCAGAGAGGAGCAAAGACCATGAATTCATTGCATTTAAAATATTGTGTACAAAGCTACAATGTCTTCGACTTTCTGAGGGATGTTGTCAGTAGGGTTCCTGACTACAGCCATGGCGGCCATTCTGAGGCTGGTGGTGCTGATGATCGGGCAATTTTAAAACGGAGGAAAGCTGCTGCTGAAGATTGTAATGACAGTGATGAAGAGGCTAAGAGATGCAAGATGCGTGAGTTGAGCCACAGTGGCAGTACTGGTAGGGGTAGAGGAAGAGGTAGAGGAAGAGGACGTGGTCGAGGAGTTCGAACTGCAGAAAGAGAGGCACATCATCAGGAAGCTGATTCTGAGCCTTGTGCTACTGTTCAGCATGGAAGCCAACATAATACTGACATGAACATGGCAATGAATGATGGTTCAGAGTCAAAGGAGCTATTGAAAGAGAATCTTGCAGTTCCTGTTGAAAACACTGAATCACTCCAAAACATTGATCTGAATGCTAACATGAATGAAAATGAGGACAAAAATGCTAGTGCGACAGCTAATGCTTCATTGTCTGAACCTGCAACAGAGTTGAAGCATGAAGAAATTCCAGGGTGGTCTCTTTCTGATTTGGACAAGATGGCCATTAACACCATGCAGCTTGCACACCTTGGTAGGGGATTAGAAGAGGATGAGGAAGATTATGATGGAGAAGGGTAA 858 0.4371 MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKYCVQSYNVFDFLRDVVSRVPDYSHGGHSEAGGADDRAILKRRKAAAEDCNDSDEEAKRCKMRELSHSGSTGRGRGRGRGRGRGRGVRTAEREAHHQEADSEPCATVQHGSQHNTDMNMAMNDGSESKELLKENLAVPVENTESLQNIDLNANMNENEDKNASATANASLSEPATELKHEEIPGWSLSDLDKMAINTMQLAHLGRGLEEDEEDYDGEG 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0631 285 MobiDBLite consensus disorder prediction 226 250 - -
Lal9g0631 285 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 284 - -
Lal9g0631 285 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Lal9g0631 285 MobiDBLite consensus disorder prediction 114 194 - -
Lal9g0631 285 MobiDBLite consensus disorder prediction 171 189 - -
Lal9g0631 285 MobiDBLite consensus disorder prediction 151 169 - -
Lal9g0631 285 PANTHER HISTONE SUPERFAMILY PROTEIN 1 284 - -
Lal9g0631 285 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Lal9g0631 285 MobiDBLite consensus disorder prediction 114 137 - -
Lal9g0631 285 SUPERFAMILY Histone-fold 4 89 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0631 Lal-Chr9 4296893 4300505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0631 1 272 CCAAT-HAP5 Transcription Factor Family AT3G12480 49.827 2.34e-73 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Lal9g0631 CBFD_NFYB_HMF 6.6e-19 CL0012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0631 9 4296893 4300505 Lal9g0631 9 4296893 4300505 ECH