Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0619 ATGTTCATACTGAATTTAACTGCTACTTATAGAATTAAGGATATGATGGTGGCTATGATCTATACAGAGGAGACCGCAATCGATACTTTTCATGTTTCTGACTTTGGAGCATTTGACCAATCAGATCGCTTAGAGAATGTTGTTGACCTGAGTGGAAATTCAATTTATAACTCACTAAAAGTAAGTAGCCAAACAATTTCTCCAGGTCCTGTTCACATTGGTACTCTTGATAAGTTGCGAACTTCACTTGATAAAAACCCATTGACGAACCAAACAGAGCCACATAGGTTGCAATTTCAACAGGAAAAGGTTCAATCATCAAACCCTGTCAGCATATTAGTTGGTAACACGGAAAACCAGGAAGAGTCTGCCATGGCTGATGGTAGTCCCAGGACTGATATTTCTACAGATGCTGACACTGATGACAAGAATCAACGGTTTGATAGAAGTCAAACTCTTGTTTGTGCGGCTTCTGACTCCAGCGACAGAACAAGGGAAAAAACAGACCAGAAGAGTCTCCGTAGGCTTGCGCAGAATCGTGAGGCAGCAAGGAAAAGTCGGTTGAGAAAGAAAGCCTATGTCCAACAGCTGGAAAGTAGTCGTTTGAAGCTGACCCAACTAGAGCAAGAGCTTCAGAGAGCTAGGCAGCAGGGAGTCTTCATATCAAGCTCTGGTGATCAAGCACATTCAATGAGTGGAAATGGGGCAATGCAGTTTGATGCTGAATATGCAAGGTGGCTGGAAGAGCAGAATCGACAAATTAATGAGCTAAGAGCAGCCGTAAATTCTCATGCAAGTGATACCGAACTCCGCATGGTTATTGATAGTATATTGGCACATTATGATGAGATCTTTAGGCTGAAAGGTATTGCAGCTAAGGCTGATGTTTTCCATTTGTTGTCTGGCATGTGGAAAACACCCGCCGAGAGGTGTTTTTTGTGGCTAGGTGGTTTTCGGTCATCTGAAGTCCTCAAGCTTCTTGTAAATCAATTGGAACCTCTCACGGAGCAGCAGGTGGTGGGTATCACGAACTTGCAGCAATCATCACAACAAGCAGAAGATGCATTATCTCAGGGAATGGATGCATTGCAACAGTCCCTTGCTGAGACATTGTCCACTGGATCACAGAACTCATCTGGTTCATCAGGGAATGTGGCAAATTACATGGGTCAAATGGCAATGGCCATGGGTAAGCTAGGGACACTTGAAGGGTTTATTCGACAGGCTGATAATCTGCGCCAGCAAACTCTCCAGCAAATGCACCGTATACTGACAACTCGCCAATCGGCTCGTGCTCTCCTTGCAATACATGACTATTTTTCGCGGCTACGTGCTCTCAGTTCGCTCTGGCTTGCCCGCCCAAGATATTGA 1371 0.4449 MFILNLTATYRIKDMMVAMIYTEETAIDTFHVSDFGAFDQSDRLENVVDLSGNSIYNSLKVSSQTISPGPVHIGTLDKLRTSLDKNPLTNQTEPHRLQFQQEKVQSSNPVSILVGNTENQEESAMADGSPRTDISTDADTDDKNQRFDRSQTLVCAASDSSDRTREKTDQKSLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGVFISSSGDQAHSMSGNGAMQFDAEYARWLEEQNRQINELRAAVNSHASDTELRMVIDSILAHYDEIFRLKGIAAKADVFHLLSGMWKTPAERCFLWLGGFRSSEVLKLLVNQLEPLTEQQVVGITNLQQSSQQAEDALSQGMDALQQSLAETLSTGSQNSSGSSGNVANYMGQMAMAMGKLGTLEGFIRQADNLRQQTLQQMHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRY 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0619 456 CDD bZIP_HBP1b-like 171 223 - -
Lal9g0619 456 Coils Coil 247 267 - -
Lal9g0619 456 Pfam Seed dormancy control 253 328 IPR025422 GO:0006351|GO:0043565
Lal9g0619 456 SMART brlzneu 167 230 IPR004827 GO:0003700|GO:0006355
Lal9g0619 456 ProSiteProfiles DOG1 domain profile. 236 453 IPR025422 GO:0006351|GO:0043565
Lal9g0619 456 Coils Coil 190 217 - -
Lal9g0619 456 Pfam bZIP transcription factor 171 211 IPR004827 GO:0003700|GO:0006355
Lal9g0619 456 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 174 189 IPR004827 GO:0003700|GO:0006355
Lal9g0619 456 Gene3D - 170 219 - -
Lal9g0619 456 PANTHER TRANSCRIPTION FACTOR TGA2.3-LIKE ISOFORM X1 47 455 - -
Lal9g0619 456 MobiDBLite consensus disorder prediction 134 148 - -
Lal9g0619 456 PANTHER TRANSCRIPTION FACTOR TGA9 47 455 - -
Lal9g0619 456 MobiDBLite consensus disorder prediction 118 189 - -
Lal9g0619 456 SUPERFAMILY Leucine zipper domain 171 214 IPR046347 GO:0003700|GO:0006355
Lal9g0619 456 MobiDBLite consensus disorder prediction 160 183 - -
Lal9g0619 456 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 169 213 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0619 Lal-Chr9 4214444 4220967 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal9g0619 DOG1 7e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0619 9 4214444 4220967 Lal9g0619 9 4214444 4220967 ECH
Lal1g0650 1 4234135 4240256 Lal9g0619 9 4214444 4220967 LSH
Lal2g0708 2 4358200 4364869 Lal9g0619 9 4214444 4220967 LSH