Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0611 ATGAACAAAGAGCTTACAGGGTTGGTGAAAGCTTGGGAAGCAGCAGTTATAAAATCAGCTTGTCCAAAGAAAAGGGTAAACAGCATCTTCACACCCATGCATGTTGCTCATGTTGATGATGACAATGATGTTTCTCAAATTGTTGAGAAGGTTCTCTCCAATGGTGACATATATAAAGGCCAATGGCATGAGAATTTCCCACATGGCCATGGAAAGTATTTGTGGAGTGATGGGTGCATGTATGTGGGTGAATGGAAGAATGGTGATATCATTGGTAAGGGTATTTTCAGCTGGGCAAGTGGTGCCACATATGAAGGTGATTTCAAGAGTGGTGGTTATATTGATGGTAAGGGAACTTACATTGGTCCTATTGGGGACACATACAAAGGTTGTTGGGTTATGGATTTGAGAAATGGTCAAGGGACTCAGAGTTATCCTAATGGAGATTTCTATGATGGTGATTGGAAAAGGGGGTTGCAAAGTGGACAAGGGAGGTATCAATGGAAGAATGGGAACCATTACAATGGTCAATGGAGGCATGGTGTGTTTTATGGGAATGGGACAATGATGTGGAGCAATGGTAATAGGTATGATGGTTGTTGGGAAGAGGGTCTGCCCAAAGGGAATGGAACATTCAGGTGGAATGATGGGAGTTTCTATGTTGGTGTATGGAGTAAAGATCCAAAGGAGCAAAATGGGACTTATTACCCTTCTTCTGGTTCATTTGGTGGCCATTTGGAATGGGATCCTCAGGAGCTTTTCTCTGTGGACTTGAATGATTGTAAGGTTTGTCCCTGTGAGAAGGTCTCAATTTTTCCTTCACAGAGAATATTGAACTATGATGCATGTGTGATTAGGCCTAGGAAAATATCGGTGGATGGAAGGCTTAGTAATTATAGTTCTGAAGATGGGTCTTATTCTTATGATGGCTTGGAAAGTCCTCAGGTTGGTAATTCTATTCCAAGGGTACCACATTTGAGACTAAAAGCTCCCAAGAAACAAGGGGAGACTATATCTAAAGGGCATAAGCACTATGAGCTCATGCTTAATCTGCAGCTAGGTATAAGACACGCTGTTGGAAGACCTGCTCCAAGTTCATCTCTTGATTTGAAGTCTTCTGCATTTGACCCCAAAGAAAAAGTATGGACCAAATTTCCACCAGAAGGATCCAAGCACACCCCACCTCACCCGTCCTGCGAGTTTAGATGGAAAGACTACTGCCCTGTAGTGTTTAGGGCTCTAAGAAAATTGTTTAAAGTAGATCCAGCGGATTACATGATATCGTTATGTGGGGATGATGCCCTTCGGGAGCTCTCGTCCCCTGGAAAAAGTGGAAGTTTTTTTTATCTGACGAATGATGACCGCTACATGATAAAGACCATAAAGAAAGCAGAAGTAAAAGTTTTTTTGAGAATGCTGCCTGGTTACTACAAACATGTTCGGGCTTTTGAGAACACTCTAGTCACTAAGTTCTTTGGCCTCCATTGTGTTAGATTAACAGGAGCTTCACAGAAGAAGGTTCGATTTGTCATCATGGGAAATCTATTCTGTTCACAATACTCCATCCATAGGCGCTTTGACTTGAAAGGTTCAACTTTTGGTCGCTCAACTGATAAACCTGTGGAAGAAATAGAGCCCACTACAACACTTAAGGACCTTGATCTAAATTTTATATTCAGGTTGCGGAAGTCTTGGTTTCATGAATTCTGCAGGCAAGTAGATAGGGACTGTGACTTTCTTGAACAAGAGAGGATTATGGATTATAGCATGTTGGTTGGTCTTCACTTTCGAGGAATATCATGGAGTGACAACAGTACACCTTCCGGCGCTCGAACCCCAACTGGTAATTGTAACTCTGATGATGGAGCCCATCGTCTTTCAGGAGTGGATGTGGATCATCTTGTAGTAGATCCTAGTCGGTGGACTCAATTAGGTATTAACATGCCAGCACGGGCCGAATTGACTCGACGGAGAAGTGTTTGTGACACTCCTCAGCTGGTGGGAGAGCCAACGGGGGAGTTATACGAGATTATCATCTTTTTCGGTATCATAGACATATTACAAAACTATGACATTAGTAAAAAGCTTGAGCATGCTTATAAAGCATTCCAGTGTGATCCGACCTCAATCTCCGCTGTTGATCCAAGGCTATACTCAAAACGGTTTCGCGATTTCATCTTCAGTATTTTTGTAGAGGACACTTAA 2205 0.424 MNKELTGLVKAWEAAVIKSACPKKRVNSIFTPMHVAHVDDDNDVSQIVEKVLSNGDIYKGQWHENFPHGHGKYLWSDGCMYVGEWKNGDIIGKGIFSWASGATYEGDFKSGGYIDGKGTYIGPIGDTYKGCWVMDLRNGQGTQSYPNGDFYDGDWKRGLQSGQGRYQWKNGNHYNGQWRHGVFYGNGTMMWSNGNRYDGCWEEGLPKGNGTFRWNDGSFYVGVWSKDPKEQNGTYYPSSGSFGGHLEWDPQELFSVDLNDCKVCPCEKVSIFPSQRILNYDACVIRPRKISVDGRLSNYSSEDGSYSYDGLESPQVGNSIPRVPHLRLKAPKKQGETISKGHKHYELMLNLQLGIRHAVGRPAPSSSLDLKSSAFDPKEKVWTKFPPEGSKHTPPHPSCEFRWKDYCPVVFRALRKLFKVDPADYMISLCGDDALRELSSPGKSGSFFYLTNDDRYMIKTIKKAEVKVFLRMLPGYYKHVRAFENTLVTKFFGLHCVRLTGASQKKVRFVIMGNLFCSQYSIHRRFDLKGSTFGRSTDKPVEEIEPTTTLKDLDLNFIFRLRKSWFHEFCRQVDRDCDFLEQERIMDYSMLVGLHFRGISWSDNSTPSGARTPTGNCNSDDGAHRLSGVDVDHLVVDPSRWTQLGINMPARAELTRRRSVCDTPQLVGEPTGELYEIIIFFGIIDILQNYDISKKLEHAYKAFQCDPTSISAVDPRLYSKRFRDFIFSIFVEDT 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0611 734 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 430 728 IPR002498 GO:0016307|GO:0046488
Lal9g0611 734 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 4 38 733 - -
Lal9g0611 734 SUPERFAMILY SAICAR synthase-like 340 730 - -
Lal9g0611 734 SMART morn 56 77 IPR003409 -
Lal9g0611 734 SMART morn 79 100 IPR003409 -
Lal9g0611 734 SMART morn 195 216 IPR003409 -
Lal9g0611 734 SMART morn 149 170 IPR003409 -
Lal9g0611 734 SMART morn 172 193 IPR003409 -
Lal9g0611 734 SMART morn 126 147 IPR003409 -
Lal9g0611 734 SMART morn 102 124 IPR003409 -
Lal9g0611 734 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 145 242 - -
Lal9g0611 734 PIRSF PIP5K_plant 306 734 IPR017163 GO:0005524|GO:0016308
Lal9g0611 734 PIRSF PIP5K_plant 4 313 IPR017163 GO:0005524|GO:0016308
Lal9g0611 734 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 53 158 - -
Lal9g0611 734 Gene3D - 515 730 - -
Lal9g0611 734 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 38 733 IPR023610 -
Lal9g0611 734 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 330 514 IPR027484 -
Lal9g0611 734 SMART PIPK_2 371 731 IPR002498 GO:0016307|GO:0046488
Lal9g0611 734 Pfam MORN repeat 151 172 IPR003409 -
Lal9g0611 734 Pfam MORN repeat 104 127 IPR003409 -
Lal9g0611 734 Pfam MORN repeat 58 80 IPR003409 -
Lal9g0611 734 Pfam MORN repeat 174 196 IPR003409 -
Lal9g0611 734 Pfam MORN repeat 197 218 IPR003409 -
Lal9g0611 734 Pfam MORN repeat 128 149 IPR003409 -
Lal9g0611 734 Pfam MORN repeat 81 102 IPR003409 -
Lal9g0611 734 Gene3D - 47 92 - -
Lal9g0611 734 Gene3D - 93 133 - -
Lal9g0611 734 Gene3D - 134 186 - -
Lal9g0611 734 CDD PIPKc_AtPIP5K_like 345 729 - -
Lal9g0611 734 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 337 730 IPR002498 GO:0016307|GO:0046488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0611 Lal-Chr9 4134184 4138039 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0645 1 4201037 4205987 Lal9g0611 9 4134184 4138039 LSH
Lal2g0703 2 4293453 4297917 Lal9g0611 9 4134184 4138039 LSH