Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0598 ATGGAACAATCAATATTACACAAGCAGCTTCAATACAATATCATGGAACCTAGAAAGGAGGAATTATATCCTGTATCACAGTCGGTAATGCAGGACCCCATGAATGACGTTTATATTAGCAGAAGACCACTTGACCATAACACATTGGATGCTAAAGCAGTACTTAATTATTCAATACAAACTGGTGAGGAATTTTCTCTTGAATTTATGCGAGACAGGGTGAACCAAAGGAAGCCTGTATTTTCAAATGTTGGTGATTCCAATTATACAACTGGTTATATGGAACTGAAAGGAGGTTTATGCATCAACCACGTAGGTTCTGAAAGTGGGTCAAAAATTTCTACGCTCTCAATAGTTGAGAAAGGTCCAGCAGAGTTTAACAGACAGGGTAGACCAGTACATGGAGACAGAAGCAATTATGGGTCAATTCGATCAATGCCAAGAACTTCATTGAATCAGGAGAATAGTCGATTTTTGAATGGGCGTGGCTCTTCTGGAGGTTATAATAGCTCATCAATGATGATTAAGTGTCTTTGTAGTTTTCGTGGTAGAATATTACCACGACCGAGTGATGGAAAGCTAAGGTATGTTGGAGGTCAAACACGAATCCTCTGTATTAGAAAGGACATATCTTGGCAGGAGCTTATACAGAAAGCATTGCTAATATACAATCAGGTTCATGTACTAAAGTATCAACTTCCCGGGGAAGATCTTGATGCTTTGATATCTGTATCATCTGATGAGGATTTGCAGAATATGATGGAGGAATGTAATCATTTCGAAGGTAGAGAATACCCACAAAAGCTTAGGATGTTTCTGTTCTCAATTAGTGATTTGGAAGATGCTCAGTTTGCTCTCAGTAGCAGTAGCACAGGTGATGATTCTGAGGTCCAGTATGTTGTTGCTGTTAATGGCATGGACTTGGGATCAAGAAACCACTCAACTGCACTTGGTGTCGGCTTTTCAGCAAATGATATACGTGAATTGGACAGGCAAAATATGGAGAGGGAGACTAGTAGAGTTGCTGTAGAATCTGTTGGTGTAAGCAGTGATCCCTTGATTAACACATTTGACTATTCATTGGCTACTCGGTTTTCACAACCAGGACAACTAACCTTTTCAAATTCTTATGAAACCAATCAACTGTCTTATGGTGACCAAATGGTACAAGCTGGAGATACTAATCATCAATATCATGTTCACCATGGACTTAATCCTTCTCACAACCCTTTGATCTTAGAGACTCCTATTTCTTTGGTTACTCATGTACTGAATAATCAACAAGGGGTTCTCAATGAAAATCACCCACCAAGAGGATTTCAAATACAAAATTCAGAAATACCAATGATGCAGGAGAAAAAGATTGGTGATAGTTCAGTTGAACCGGGAAGCGACACCGGTGACGCTTTATCCTCGGAAACCCCAGCTCCCTCACAGCCTTTTGATGGCTACTTGAAAAATATTTGTCATGAAGCATCAAGTGTAGTTACCATGCCCGATGGGCATCTGCCTTCAACAAAAAAGGTTGAGCACCAAGATTATGATGAGACCTCTACATCAAGCAGTGTGTTCGTTCCTGCTTATGTTGATTCCCATTCCACTGGAATTGATTTGACATGTCTTCATCCTCCCCCACTTCCTAAAAGAGTTTACTGTTCAGAAAGATCTCCCAAGGAGCAAGTAGAGTTGCTGAATCGGTCCTCAAAGTCAGATGACAACCTCAATTCTCAGTTTCATGTTTCAGACTTACTTTCTGATGTCAACCCAGAGGATTCAATAAATGAATCTGGTGATAACTTGCATGACGGTAATCTTTCTAATCCTACCGAGGAGTTGAGTACTGCAGCAAAGTGCTTGCCTGCAGATGACCATACCATTGACAATGGGTTTGCCAAGCCTGAAATGAACAAGCCATTCCCTGATACAAACAGTCAGACTAAGTCAAACCTATCTAAGCGTATGGATCCTGAGTTGAATAAGGTATTACAGAACAATGATGGAAGTAAAGATGTGGTAAAAGATGATCATTTCAGCCCATTGTTTGACAAAACGAAAACCAAAGATGATCAATCAAACCTTCCTGCTTTGGATCATGTTTCTTCTGTTATGCATCATGATGATCCAGCATCCAGTCTTCCAGATATTGATTGGGGTGATGCCTATGGAAAGGAATCTAATGATAATTATATGGTGCAACCACCGCCTGTTTCTTTAATCGGGAACATAACCAAAGATGTTTCTCAAGATTCCCCCCCAAATGTTGTTTCCGGACAACCACAAAGTGACATTCTTATTGATATTGATGACCGATTTCCCCGTGATTTACTTTCTGATATATTCTCTAAAGCAATACTTGCAGAAGATCCTTCAACTCCCCACCCACTAGCCACAGATGGAGTAGGCTTAAGCATCAATATGGAAAATCATGAACCTAAATCATGGTCATATTTTCAAAATTTGGCACAGGAAGGGCTTGAAAATGTATCTCTTATTGACCAGGATCATCTTGGTTTTTCACCCGTAATAGGAAAATCAGGAGATAATAGAGATCACCACTTTATGCCTCTAACAACTGATGGGTTTCATCTAGACCATGCAGATTCCCACCTCAGTTATGGTGAAGAAAATCAGGACTTACATCCAAGGATTGGCACAGAAACCACTGTTCTGAGCTCCAATTATGATGAATCTCATTCCCTAGTGAACGACACAGAAAGTATGCAGTTTGAAGCTATTATAGAAAGCCTAAGAGCACAAGAGTCAGAGTATGAGGATGGGAAGTTTGAAACAAGAAATAGCAATCTGCCTCCTCGTGATCCTTCTTTGGGAGATTTTGATATTGATGCCGTGCAGGTCATAAAAAATGTAGATCTTGAAGAGCTGAGAGAGCTAGGTTCTGGTACCTTTGGGACTGTATATCATGGAAAATGGAGAGGAACAGATGTTGCCATTAAAAGAATAAAAAAAAGCTGCTTCACTGGTCGCTCATCCGAGCAAGAGAGATTGACTATAGAGTTCTGGCGAGAAGCTGCCATTCTTTCCAAGCTTCATCATCCAAATGTGGTTGCATTTTATGGTGTGGTCCAGGATGGACCAGGGGGAACGATGGCCACAGTTACAGAGTACATGGTGGATGGTGCTCTTAGGCACATATTACTTCGTAAAGATAGGGTTCTTGATCGCCGCAAGAGGCTGATAATTGCAATGGATGCAGCTTTTGGAATGGAATATTTGCACTCAAAAAACATTGTGCATTTTGACTTAAAATGTGACAATTTACTTGTGAATTTGAAAGATCCTTTACGGCCAATATGCAAGGTTGGTGATTTTGGTTTGTCAAAAATTAAACGAAATACATTGGTAACTGGCGGTGTGCGGGGGACTCTGCCTTGGATGGCACCAGAGCTGCTTAGTGGCAGCAGCAACAAGGTCTCAGAAAAGGTTGATGTCTTCTCATTCGGCATAGTATTGTGGGAGATTCTAACCGGGGAAGAGCCATATGCCAACATGCACTATGGTGCAATTATTGGTGGGATTGCAAATAATACATTAAGGCCAACCATTCCAAGTCATTGTGATCTTGAATGGAGAACATTGATGGAGCAATGTTGGGCAGCCAATCCAGCCATCAGGCCGTCCTTCACCGAAATCGCGAGTCGCTTGCGCGTAATGTCGGCAGCAGCTAGCCAAACTAAAACACAGAACCAGAAGGCATCTAAATGA 3723 0.4107 MEQSILHKQLQYNIMEPRKEELYPVSQSVMQDPMNDVYISRRPLDHNTLDAKAVLNYSIQTGEEFSLEFMRDRVNQRKPVFSNVGDSNYTTGYMELKGGLCINHVGSESGSKISTLSIVEKGPAEFNRQGRPVHGDRSNYGSIRSMPRTSLNQENSRFLNGRGSSGGYNSSSMMIKCLCSFRGRILPRPSDGKLRYVGGQTRILCIRKDISWQELIQKALLIYNQVHVLKYQLPGEDLDALISVSSDEDLQNMMEECNHFEGREYPQKLRMFLFSISDLEDAQFALSSSSTGDDSEVQYVVAVNGMDLGSRNHSTALGVGFSANDIRELDRQNMERETSRVAVESVGVSSDPLINTFDYSLATRFSQPGQLTFSNSYETNQLSYGDQMVQAGDTNHQYHVHHGLNPSHNPLILETPISLVTHVLNNQQGVLNENHPPRGFQIQNSEIPMMQEKKIGDSSVEPGSDTGDALSSETPAPSQPFDGYLKNICHEASSVVTMPDGHLPSTKKVEHQDYDETSTSSSVFVPAYVDSHSTGIDLTCLHPPPLPKRVYCSERSPKEQVELLNRSSKSDDNLNSQFHVSDLLSDVNPEDSINESGDNLHDGNLSNPTEELSTAAKCLPADDHTIDNGFAKPEMNKPFPDTNSQTKSNLSKRMDPELNKVLQNNDGSKDVVKDDHFSPLFDKTKTKDDQSNLPALDHVSSVMHHDDPASSLPDIDWGDAYGKESNDNYMVQPPPVSLIGNITKDVSQDSPPNVVSGQPQSDILIDIDDRFPRDLLSDIFSKAILAEDPSTPHPLATDGVGLSINMENHEPKSWSYFQNLAQEGLENVSLIDQDHLGFSPVIGKSGDNRDHHFMPLTTDGFHLDHADSHLSYGEENQDLHPRIGTETTVLSSNYDESHSLVNDTESMQFEAIIESLRAQESEYEDGKFETRNSNLPPRDPSLGDFDIDAVQVIKNVDLEELRELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTIEFWREAAILSKLHHPNVVAFYGVVQDGPGGTMATVTEYMVDGALRHILLRKDRVLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLSGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIANNTLRPTIPSHCDLEWRTLMEQCWAANPAIRPSFTEIASRLRVMSAAASQTKTQNQKASK 1240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0598 1240 CDD STKc_MAP3K-like 964 1221 - -
Lal9g0598 1240 SUPERFAMILY Protein kinase-like (PK-like) 957 1220 IPR011009 -
Lal9g0598 1240 Gene3D - 193 276 - -
Lal9g0598 1240 MobiDBLite consensus disorder prediction 126 147 - -
Lal9g0598 1240 MobiDBLite consensus disorder prediction 464 478 - -
Lal9g0598 1240 PANTHER - 94 1240 - -
Lal9g0598 1240 PRINTS Tyrosine kinase catalytic domain signature 1040 1053 IPR001245 GO:0004672|GO:0006468
Lal9g0598 1240 PRINTS Tyrosine kinase catalytic domain signature 1077 1095 IPR001245 GO:0004672|GO:0006468
Lal9g0598 1240 PRINTS Tyrosine kinase catalytic domain signature 1148 1170 IPR001245 GO:0004672|GO:0006468
Lal9g0598 1240 PRINTS Tyrosine kinase catalytic domain signature 1192 1214 IPR001245 GO:0004672|GO:0006468
Lal9g0598 1240 SMART PB1_new 189 276 IPR000270 GO:0005515
Lal9g0598 1240 Pfam PB1 domain 191 274 IPR000270 GO:0005515
Lal9g0598 1240 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1083 1095 IPR008271 GO:0004672|GO:0006468
Lal9g0598 1240 MobiDBLite consensus disorder prediction 454 484 - -
Lal9g0598 1240 MobiDBLite consensus disorder prediction 631 650 - -
Lal9g0598 1240 Pfam Protein tyrosine and serine/threonine kinase 959 1221 IPR001245 GO:0004672|GO:0006468
Lal9g0598 1240 MobiDBLite consensus disorder prediction 586 609 - -
Lal9g0598 1240 Gene3D Transferase(Phosphotransferase) domain 1 1046 1240 - -
Lal9g0598 1240 SMART serkin_6 958 1224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0598 1240 ProSiteProfiles Protein kinase domain profile. 958 1223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0598 1240 SUPERFAMILY CAD & PB1 domains 190 278 - -
Lal9g0598 1240 CDD PB1_UP2 178 274 - -
Lal9g0598 1240 PANTHER SERINE-THREONINE PROTEIN KINASE 94 1240 - -
Lal9g0598 1240 Gene3D Phosphorylase Kinase; domain 1 951 1045 - -
Lal9g0598 1240 ProSitePatterns Protein kinases ATP-binding region signature. 964 989 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0598 Lal-Chr9 4023369 4031258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0598 47 629 MAP Kinase Kinase Kinase AT1G16270 38.754 1.69e-87 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Lal9g0598 PK_Tyr_Ser-Thr 3.9e-62 CL0016