Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0596 ATGCTGATGAGTATACATTCACTCCAAAACTCAAGTAACTGCATAATAGTCATCATGGTTTGTTGCTGCAAATTCAGGGAACCTTGTTTATTGCTTGTTTTCACATACTTGTGGTTGTGGAATAGTTCTATCCATAATGTTAAAGCTGGTGAATATGACAGTTTGAAGCCTGGTGATACACTGAATAACACACAACACTTATGTTCTGAAAATCGCAATTATTGCATCCGATTTTTGCAACAAACTACTGGTTCCAATTACTTGGACATACTGAAAAGAGATAACCTTGTTATTTGGACTGCAAATAGAAATCAACCTATTACAAATGGATCAGGCATTCTATCTTTGGACAAATCTGGTGTGCTCAAGATTGAAGCACAAGATTTGAAGCCAATAATCCTTTATTCTCCACCACCAACTCAATTTAACAACAACAACATAAGCATTGTGGCTACTATATTGGATTCAGGCAACTTTGTGGTGCAACAACTTAACCCCAATGGATCCACCAAGAGAGTGTTGTGGCAAAGTTTTGATTATCCCACTGATACTTTGTTTCCTGGGATGAAGTTAGGTGTTAATCACAAAACAGGTCATAGTTGGTCATTGGTTTCATGGGTGAGTGAAACTTTGCCATCTTTTGGTACCTTCAAGCTTGAATGGGAACCAAAAGAAGGAGAATTGGTCATCACTAGAATAGGGAAAGTGCTTTGGAAAAGTGGGAAACTAATAAAAAACAGGTTTCAGCACATTCCAGAAGATTCCAAGAGTAATTATAGCTACACCATAGTCTCAAATGAGGATGAAGATTACTTCACATTCACAGCATCAAATGAAGAACCTCTAACATGGACTTTGTATGAAACTGGACAATTGATAAGTTCAAATGGAAAAGATATAGCAAAAGCAGATAAGTGTTATGGATATAACAATGATGGAGGCTGCCAAAAATGGGAGATACCAACATGCAGGGATAGTAGTGATGTATTTGAGAGTAGAACAGGTTACCTTAATTTTTCAAGTGATGTTACAAGATATGAAACAAATAGTAGTTATGGCATAGGTGATTGTCAAGCTATTTGTTGGAGCAACTGTACCTGTGATGGATACATGACATTTGATGAGGATAATGGAACTGGATGCATTTTCTTTTTGGGAAAATCATTGGAAGGTGTTATTTCAGTCAGTGTTGGCCAAAAGTTTAACATGGTAGTGAAGAAACCGCACACTAGAGGTAGCAAAAAGTGGATATGGTTAAGTGTTGTAATAGCAACTGGTCTACTCATAATTTGCACTTCTGTTCTGTTCCTAGTCAAAAACAAAAGAAAACATGTGGTTCAAGATAAGAGAAGGGAGAAAATGGAGACTGAAATGCAAGGCATAACTTCCGAAGGATCTACCGATATGAAAGATTTAGAAGACGAGTTAAACAAGGGACATGATTTCAAAGTATTTAGCTATGCATCAGTAATAGAGGCTACAGACAATTTCTCATTGGAAAACAAGTTAGGACAGGGAGGCTTTGGGCCTGTTTATAAGGGGATTCTGCCAACCGGGAGAGAAATCGCCATGAAACGACTTTCAAAAACTTCTGGACAAGGAATTGATGAATTTAAAAATGAATTAAAGCTCATATGTGAACTTCAGCACATGAATCTTGTTCAGTTAATTGGTTGCTGCATTTCTGAACAAGAGAGGATACTGATTTATGAGTATATGTCAAATAAAAGCTTGGATTTCTTTTTATTCGATAGTACTAGAAGCAAGTTGTTAAATTGGCAGAACCGATTCAACATAATAGAAGGAATATCTCAAGGATTACTCTACCTTCATAAGTATTCAAGACTCAAAATTATTCATAGAGACTTGAAGGCCGGTAACATACTTCTCGATGAGAATATGAACCCCAAAATTTCAGACTTCGGCATGGCGAGAATGTTTATGCAGCAGGAATCCACAGTGAATACAAACAAGATTGTTGGTACACATGGTTACATGTCCCCGGAATATGTCATGGAAGGAGTTTTCTCCACAAAGTCCGATGTCTATAGTTTTGGAGTGTTGTTGCTTGAAATTGTTAGCGGAAGAAAAAACAATAGCTTCTATGATGCTGAGCACCCTCTCAATCTAGTAGGACATGCATGGGAGTTATGGAAAGATGGTGTGTGTCTAAAGTTAATAGATCCATCATTAAATGGCATGTTTGATCCCGATGAAGCGCAACGATGCATTCATGTTGGTCTCTTATGCGTAGAACATTACGCAAAAGATCGACCCGGTATGTCTGATATTATATCGATGTTAACAAATAAAAGTACTACAGTTACCTTGCAGCCTACAAGACCAGCATTCTACTTTGGAAGAAAGATATTTGAGGGAGAAACATATTCTAAATCTATAGAGTCCAATACTGATTCTACAAAGGAAATTTCTACTTCAACTGAAGTAGAACCAAGGTAA 2460 0.3715 MLMSIHSLQNSSNCIIVIMVCCCKFREPCLLLVFTYLWLWNSSIHNVKAGEYDSLKPGDTLNNTQHLCSENRNYCIRFLQQTTGSNYLDILKRDNLVIWTANRNQPITNGSGILSLDKSGVLKIEAQDLKPIILYSPPPTQFNNNNISIVATILDSGNFVVQQLNPNGSTKRVLWQSFDYPTDTLFPGMKLGVNHKTGHSWSLVSWVSETLPSFGTFKLEWEPKEGELVITRIGKVLWKSGKLIKNRFQHIPEDSKSNYSYTIVSNEDEDYFTFTASNEEPLTWTLYETGQLISSNGKDIAKADKCYGYNNDGGCQKWEIPTCRDSSDVFESRTGYLNFSSDVTRYETNSSYGIGDCQAICWSNCTCDGYMTFDEDNGTGCIFFLGKSLEGVISVSVGQKFNMVVKKPHTRGSKKWIWLSVVIATGLLIICTSVLFLVKNKRKHVVQDKRREKMETEMQGITSEGSTDMKDLEDELNKGHDFKVFSYASVIEATDNFSLENKLGQGGFGPVYKGILPTGREIAMKRLSKTSGQGIDEFKNELKLICELQHMNLVQLIGCCISEQERILIYEYMSNKSLDFFLFDSTRSKLLNWQNRFNIIEGISQGLLYLHKYSRLKIIHRDLKAGNILLDENMNPKISDFGMARMFMQQESTVNTNKIVGTHGYMSPEYVMEGVFSTKSDVYSFGVLLLEIVSGRKNNSFYDAEHPLNLVGHAWELWKDGVCLKLIDPSLNGMFDPDEAQRCIHVGLLCVEHYAKDRPGMSDIISMLTNKSTTVTLQPTRPAFYFGRKIFEGETYSKSIESNTDSTKEISTSTEVEPR 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0596 819 Pfam D-mannose binding lectin 97 206 IPR001480 -
Lal9g0596 819 Pfam Protein tyrosine and serine/threonine kinase 498 767 IPR001245 GO:0004672|GO:0006468
Lal9g0596 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 97 209 IPR036426 -
Lal9g0596 819 Gene3D Transferase(Phosphotransferase) domain 1 573 780 - -
Lal9g0596 819 Gene3D Phosphorylase Kinase; domain 1 457 572 - -
Lal9g0596 819 Gene3D - 47 178 IPR036426 -
Lal9g0596 819 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 32 790 - -
Lal9g0596 819 SUPERFAMILY Protein kinase-like (PK-like) 481 787 IPR011009 -
Lal9g0596 819 Pfam PAN-like domain 341 385 IPR003609 -
Lal9g0596 819 PIRSF SRK 24 302 IPR024171 GO:0004674
Lal9g0596 819 PIRSF SRK 295 819 IPR024171 GO:0004674
Lal9g0596 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Lal9g0596 819 ProSiteProfiles Bulb-type lectin domain profile. 52 174 IPR001480 -
Lal9g0596 819 SMART blect_4 58 181 IPR001480 -
Lal9g0596 819 ProSiteProfiles Protein kinase domain profile. 497 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0596 819 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 32 790 - -
Lal9g0596 819 SMART serkin_6 497 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0596 Lal-Chr9 4014319 4018341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0596 474 819 Receptor kinase-like Gene Family AT4G11530 52.722 9.08e-119 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal9g0596 PK_Tyr_Ser-Thr 5e-49 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0596 9 4014319 4018341 Lal9g0596 9 4014319 4018341 ECH
Lal2g0687 2 4195446 4199513 Lal9g0596 9 4014319 4018341 LSH