Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0590 ATGAAGGAGGGTGGTAGAAAACAAGGTGCAATGTCTCCATGTGCTGCATGCAAGCTTCTTAGAAGAAGATGTGCACAAGATTGTGTCTTTGCACCTTATTTCCCTGCAGATGAACCTCAAAAGTTTGCAAGTGTGCACAAGGTTTTTGGGGCTAGCAATGTCAACAAAATGTTACAGGAATTACCAGAAGAACAACGAAGTGATGCAGTTAAATCAATGGTATATGAAGCCAATGCAAGAGTAAGAGACCCAGTGTATGGATGTGTAGGAGCAATATCTTCTCTACAACAACAAGTTGATGTGCTACAAACCCAACTAGCACTTGCACAAGCAGAAGTTGTGCACATGAAAATTCACCAAGCCACAACATCATTAGATCATGATCAGCCACCAGTGCCTATTGCCTCAAATTCATCATCACAGACCAAGTCTTTTTTTGCTATGGACATTGTTGTTGATCAGGCCAACATGGGGGAATCCTTGTGGTCATGCTAA 495 0.4202 MKEGGRKQGAMSPCAACKLLRRRCAQDCVFAPYFPADEPQKFASVHKVFGASNVNKMLQELPEEQRSDAVKSMVYEANARVRDPVYGCVGAISSLQQQVDVLQTQLALAQAEVVHMKIHQATTSLDHDQPPVPIASNSSSQTKSFFAMDIVVDQANMGESLWSC 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0590 164 Coils Coil 92 112 - -
Lal9g0590 164 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Lal9g0590 164 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Lal9g0590 164 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 161 - -
Lal9g0590 164 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0590 Lal-Chr9 3979337 3982675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0590 1 164 AS2 family AT1G31320 68.605 6.78e-75 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal9g0590 LOB 7.1e-44 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0590 9 3979337 3982675 Lal9g0590 9 3979337 3982675 ECH