Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0562 AAAATTCAAGTGTGTGTTTATCAAAACCAGAATAACCCTACTATTGATTTGAACTTGTTCTTTCAGAAAGATAGTTCTTTTCTCTTTTTCATGGCCACTGATGCAATGGGAATTGATGGGTATTCTCTTCTGAACGATTTAAAGTTAGAAATTGAAGCAAAGGAAGGAACTTTCTCTCTCTGCTTTTGGGTTTATTTGATGAGCTCCACTACATTCCCTGCCACTGTTATTCAGCAGAATACTGGGTTTCCCTTCATTTGTGGTTTTATGTGGTTGGAATTTTATCAGAAAATAGTTTTGGTGTGGGAGGAAGGGTTGAATAAGAATTTGGCAAATTCTTCATTTGTTAATTCAATGTCACTGCACATTAACTTTGTTATGGTGGCTACATTAATCCGTGTGGTGCTCTCAAGTTCTTGTATTCTTGATTCTGAAAGTTCCTTTCAGCTTGTGATTTTTGATTCTGTGTCCAAACCTGCTTACTTAGAGAAATCAGATGAAATATTTGTTGTACTTCATGTGTGCTTAGAGTTAGACCATGAGGTCACATGTTCAAATCCTGGAAACATCCTCTTCGCTTGTTTGGATAAGGTTTACTCTGATATCTCCAAGAGTGCTCCTTTTCTTGTTATTAACGATAATAAGAGAATCAATCTCTTACCAGTTCTGATCTTACATAAAGAAGCTCCTGATACTTTGAATATCAATTCCTGGACAGAAGTTCCACATGCAACTGTAGATTTAGAATTTCCAGTGGGAAAATGGGTTCATGTTGGATGTGAGGTTTCTCCAACCCATGTCCAGCTTCAGATTAATGAAGACATTGTAGGAAAAAGGTCTCTTACTTCCTTATTAAATAGGGAACCCGATTCAAGTAATTTGAAGAAAATAACTTTGGCAAATGTTGGTGGAGATGAAGATAGTGTTAAGGGTTATGTGCACAATTTTGAAGTCTTCCCTCTTGTTTCTTCTATTAAGGATCATCATTTAAAGGATCCTCCTCTTATGTTATCAATCGATGAATCATCTGCTTCTGAGATTGAAGAAGAAAATGATGGTGTTTGGGGCATTGTTGGTGGCAAGGCATCTTGTCGTAGGAACTTCTCTTTGGATGTTGTTCTATCAGATGCCTTCGGCCAGCCAGTAGTAGATAAGGAGAATGAGGTTTTTGCTTCACTTTTGTATGCTGACACGGGGGCACCGGTGGAGAACACAACTGACGAAGAAGCACCCCTTTTGGTTAGCTATGATGGAATTGAGTTTTCATCTTGTGAAAGACCAAGTAAACTTTTGATGGGGCGTGCATCATTTAAGCTCAAGATATCTCAGCTTTCATCTAAGTGTGATAACAGGTTATTCATCCTCAGATTTTGTATTCCGAAATTGGGGAGTTATTCTTTTCTCGAGGCATACTCCCGTCCAGTTCGATGCATCTCCAGGAGCCGTAACACACGATTGTCCACTCTGGTGTGGAAAAGGTCAACTTCTGCACTTAATCGACATAGTTCATTACAGTCTTCAGCAAAGGATGATGGGCCGTTGGAACATCAGCATTCTGGTCATGAAGCAAAAGTCAATCCACTGATGAAGCGGTTTAGACTTGGACAAGACAAGATATCTGTATCAGTGAAGGCTGACCCCAACTTAGTGCGACCTGATGAGGAATGTAATTCTCATGTCTTCACTTCTAATCAGGTTGAGAATGGGTTTACAACAAGCTTGGATGGCAGACCTGCTAATTTTGATGAAGCAGATGACTGTCCATCTGATTCAGAGAGTATCGGGGAGAGAAACTCACCACCAAATAGTACGGCAAGTAGAAGATATGATATATCTGATATGACCATTTTCAAATACTGCCTGGCAGGCTTGGCTGAGAGATCTCTCATGCTTAAAGAAATTGCTCCCTCTGCTTCTGACAAAGAAATTTCTGAGTTGGCTCATCGCGTTTCATTCTATTCAGGATGTTCACACCATGGAAACCAAATATTACTTGCGAAAAGATTGATCAAAGATGGTATTAATCTTTGGAAGTTGATGTCTCCAAATAACCAGCACATTCCTTGGCAGAATGCAGTCTATGAGATTGAAGAGCAATTCTTGAAGATTGCTTCTTCTCGTTCAAGGTCTCTCTCAAATCAGGATTTAGAGCTTCTGAGAAAGATTGCTGGATGTCAAGAGTATCTAACCCAAGAGTGCTTCGAGAAGTTGTGGTGCTGGCTATACCCTGTAGCTTTTATAATATCAAGGGAGTGGATAAATCCTATATGGAATTCCACATCACCTAAGTGGATAGAGGGTTTCATAACTAAGGAGGAAGCAGAAGCTTCACTTCAAGGTCCCATAGGACTTCAAGAACCCGGTACCTTTATATTACGCTTCCCCACCTCAAGAAGCTGGCCCCACCCAGATGCTGGTAGCTTGGTTGTGACTTATGTTGGCAATGACTACAAACTTCACCACAGATTACTTTCTATGGATCATGTTTATAGCTCCGGTGACAAAGGAATTGATGCGAAACCACTGCAAGATATGCTATTGGCAGAACCGGAGCTGTCTCGATTGGGAAGGATAATAAGAAGTCATTGA 2589 0.4017 KIQVCVYQNQNNPTIDLNLFFQKDSSFLFFMATDAMGIDGYSLLNDLKLEIEAKEGTFSLCFWVYLMSSTTFPATVIQQNTGFPFICGFMWLEFYQKIVLVWEEGLNKNLANSSFVNSMSLHINFVMVATLIRVVLSSSCILDSESSFQLVIFDSVSKPAYLEKSDEIFVVLHVCLELDHEVTCSNPGNILFACLDKVYSDISKSAPFLVINDNKRINLLPVLILHKEAPDTLNINSWTEVPHATVDLEFPVGKWVHVGCEVSPTHVQLQINEDIVGKRSLTSLLNREPDSSNLKKITLANVGGDEDSVKGYVHNFEVFPLVSSIKDHHLKDPPLMLSIDESSASEIEEENDGVWGIVGGKASCRRNFSLDVVLSDAFGQPVVDKENEVFASLLYADTGAPVENTTDEEAPLLVSYDGIEFSSCERPSKLLMGRASFKLKISQLSSKCDNRLFILRFCIPKLGSYSFLEAYSRPVRCISRSRNTRLSTLVWKRSTSALNRHSSLQSSAKDDGPLEHQHSGHEAKVNPLMKRFRLGQDKISVSVKADPNLVRPDEECNSHVFTSNQVENGFTTSLDGRPANFDEADDCPSDSESIGERNSPPNSTASRRYDISDMTIFKYCLAGLAERSLMLKEIAPSASDKEISELAHRVSFYSGCSHHGNQILLAKRLIKDGINLWKLMSPNNQHIPWQNAVYEIEEQFLKIASSRSRSLSNQDLELLRKIAGCQEYLTQECFEKLWCWLYPVAFIISREWINPIWNSTSPKWIEGFITKEEAEASLQGPIGLQEPGTFILRFPTSRSWPHPDAGSLVVTYVGNDYKLHHRLLSMDHVYSSGDKGIDAKPLQDMLLAEPELSRLGRIIRSH 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0562 862 PANTHER SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 38 859 IPR001217 GO:0003700|GO:0006355|GO:0007165
Lal9g0562 862 SUPERFAMILY SH2 domain 758 852 IPR036860 -
Lal9g0562 862 ProSiteProfiles Src homology 2 (SH2) domain profile. 764 862 IPR000980 -
Lal9g0562 862 CDD SH2_SHA 753 862 - -
Lal9g0562 862 PANTHER SIGNAL TRANSDUCER AND TRANSCRIPTION ACTIVATOR 38 859 - -
Lal9g0562 862 MobiDBLite consensus disorder prediction 567 607 - -
Lal9g0562 862 MobiDBLite consensus disorder prediction 593 607 - -
Lal9g0562 862 Gene3D SH2 domain 750 860 IPR036860 -
Lal9g0562 862 MobiDBLite consensus disorder prediction 501 522 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF STAT Lal9g0562 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0562 9 3806552 3813954 Lal9g0562 9 3806552 3813954 ECH