Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0533 ATGTATGATAGTATTCATTATTCAAGTACCCAAATTGTGGTCAACATCATACTCTTTCCTCTCTGTGATCCTTCGCTTGTATTCGTCATGGGTCGCCCACCCAGCAATGGAAGCCCCGCTTTTCGCTTCATTCACTCCGAGGTTTCTGAAATGGAAACTATTCTGCAAGAACACAACAATGCAATGCCAGCACATGATATTCTTCAAGCTCTTGCTGATAAGTTCAGTGAATCACCAGACCGTAGAGGCAAGATTACAGTGCAGATGAAGCAGGTTTGGAATTGGTTTCAAAATAAGCGGTACTCTATAAGGGCAAAAACAAGTAAGACTCCTGGAAAGTTGAGTATTCCGTCTCTGACTCGGGATGATTCTGCTCCACCGAGAACTATGCCTCCACCAACCGCTGCTCCAACTCCTGGTGCTTCAGGTTCAGTTCCACCAACAGGAAAAACAATCCCAGAAAGTTCGGTTATGGAATTTGAAGCAAGATCTGGAAGAGATGGAGCATGGTATGATGTGGCTAGTTTCCTATCTCTCAGATATTTGGAGACCAATGATCCGGAGGTACTAGTACGGTTTTCTGGTTTTGGATCAGATGAAGATGAGTGGATAAATGTCCGAAGAAATGTCAGGCCACGCTCTTTGCCATGTGAATCATCAGAATGTATTGTGGTTCTCCCTGGAGATCTCATACTTTGTTTTCAGGAAGGTAGAGAGCAAGCCCTTTACTTTGATGCCCATGTGCTTGATGCTCAAAGACGGAGGCATGATGTAAGAGGCTGTCGCTGTAGATTTTTGGTTCGTTATGATCATGACCAGACAGAGGAAATTGTGCCACTTAAGAAGATTTGTCGAAGGCCTGAAAGTGAGTACAGGTTACATCAACTCAAAACTGTGAATGAGGCAGCACCCGAGGATCAGCAGAAGACTGCAATGGATCCAGCAAATGTTCATCCAACCAGGGTTACTGGTACTTCTGAAACAACACCTAAGCCGCAGCAGAATGCGAACATCCCTATCACAACACCAGCTCCACAATTAAATGTTCCTCAAGTCTCTCAGATTATGAATGTGGATCCAAAGAAAGCTGAAACAGCACCAAAGCAGCAGCATGCAAACATTCCAATCACAACACCCGATCGGCAGACAAATGTTTCTCCAGTCCCATGTGTGATGAATGTCGAGCCAAAGAAATCTGAAACAGCTACTACTGTTCTATCTGGAAACGACTCCATCGTCCCCCCTGGCTTCAATGGCACCTTTGTTACTACAAGAAGCAGTGTTCCTGAAGTCCCCAGACAGAACATGGCTGAAGGAAAGTAA 1323 0.4482 MYDSIHYSSTQIVVNIILFPLCDPSLVFVMGRPPSNGSPAFRFIHSEVSEMETILQEHNNAMPAHDILQALADKFSESPDRRGKITVQMKQVWNWFQNKRYSIRAKTSKTPGKLSIPSLTRDDSAPPRTMPPPTAAPTPGASGSVPPTGKTIPESSVMEFEARSGRDGAWYDVASFLSLRYLETNDPEVLVRFSGFGSDEDEWINVRRNVRPRSLPCESSECIVVLPGDLILCFQEGREQALYFDAHVLDAQRRRHDVRGCRCRFLVRYDHDQTEEIVPLKKICRRPESEYRLHQLKTVNEAAPEDQQKTAMDPANVHPTRVTGTSETTPKPQQNANIPITTPAPQLNVPQVSQIMNVDPKKAETAPKQQHANIPITTPDRQTNVSPVPCVMNVEPKKSETATTVLSGNDSIVPPGFNGTFVTTRSSVPEVPRQNMAEGK 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0533 440 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 30 384 - -
Lal9g0533 440 MobiDBLite consensus disorder prediction 370 386 - -
Lal9g0533 440 MobiDBLite consensus disorder prediction 107 152 - -
Lal9g0533 440 Gene3D - 217 289 - -
Lal9g0533 440 MobiDBLite consensus disorder prediction 302 345 - -
Lal9g0533 440 MobiDBLite consensus disorder prediction 364 386 - -
Lal9g0533 440 Pfam SAWADEE domain 158 284 IPR032001 GO:0003682
Lal9g0533 440 Gene3D - 38 112 - -
Lal9g0533 440 SUPERFAMILY Homeodomain-like 45 106 IPR009057 -
Lal9g0533 440 MobiDBLite consensus disorder prediction 319 345 - -
Lal9g0533 440 MobiDBLite consensus disorder prediction 126 140 - -
Lal9g0533 440 Gene3D - 155 216 - -
Lal9g0533 440 ProSiteProfiles 'Homeobox' domain profile. 34 106 IPR001356 GO:0003677
Lal9g0533 440 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 30 384 IPR039276 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0533 Lal-Chr9 3577004 3582275 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0533 9 3577004 3582275 Lal9g0533 9 3577004 3582275 ECH