Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0666 ATGGACCCGTCTATTGTGAAGCTACTTGAAGATGATGAGGACGAGACAATGCATTCAGGGGTGGACTTGGAAGCGTTCCAGGCTGCCTTAAATAGAGATATTGGAGGAGATGGGTCTGCTTCTCAGCCTTCTGGTTCAGATTCCGCTTTGTCTCAAGGAATCAACAATTCATTCAGTCAGGCAATGCCGCAGTGGCCAACTTCTAGCCATGACAATAGAACTGACAGTCAAAATCAAGAGTCTAAAACTGCACAGCAGCGGGAGCAACCTTCATCTGAGGTGGAGCTGAAGCAACATGGATCTCTTCTGGAACAACCCCAACATGTTGCTTCTCAAGTTGTAAATAATCCTCCCTTTTCACAGAAACAATCTCAAGATGAATTTCACCAATCACAGAATGTACAAGTTTCTGTCCAAAATTCTCAAATGATTGGAATTCAAAATTCTGGAAAAGATCCTGTCCAAAATCACGAGATAGTCCAAACACATAACCCTAGTAATGAATCTCAGTATGCGAAGTTGCAGCAGATTAGTAATCAACAGGATACCATTACTGAGAAGCCAAGAAGCCAAATGAACCAGACTCCTAAACAGGTACCATTTGGCCTGTTGCTACCCATCTTGATTCCTCAGCTTCCCAAAGATAGAGCCATGCAACTACAAACTCTATTTACTAAATTGAAGAAAGACGAGGTTCCGAAAGACAGTTTTGTGCGGCTTATGAAAGGTATTGTAGGGGACCAGATGCTTAGATTAGCAATAGCGAAAGTGCAACAGACAAGGCCCAACCAAGGACCTGCTGGCCAGCAACCTGCTGTAAGGATGCCAACTGTTGGTTCAGGTGCAAGACAATTTAATGATCCCCATGCTTTAGCACAACTTCATCAGAGAAGTATGAATGCTACTGCAGACCAATCTCGTATGACATCTTCAGCTGTCCATAATGTGGGGAGCAGTGCTAGAGATTCTCAGGAATTGGATGCTAAAATAGAATCTCAAGGATTGCAAACAAGCCATTTACCAACTTCCAGTTCCAACGTTGGGAGACAAGAAACAGAAAGGTCATCAATTCATGTACAAGGGCTTAATAAGCAGCAGCAGCAACATCTACATTTCTCTTCCGCATATGGAAGTACTGGTGGTAATTATAACCCTTTTTCTGGAACAACCACTAGTTCCACTTCATCTATCAAACTTCAACCACATAATTCGCACTTGGGTCAAACTCCACATCAAAACACTGGTCCAAATCACATAGGTGGGGTACCACAAGGATTGAATGTCACGAGTATGCCAAAACTTGAACGACATAATTCTTTCAGTGATCCCAAGAGGCTACCTGGTGGATCTGTGTCGTCCGTGGGAAATAATACGACACCCCAGCAAACTTCAAATGCTTGGAAACCATCAATAAACAAAGAACAAAATATTGAACAGGGTAGTTCTAATCAAGGAATTGTAAAGGATGAGTTTTCAAGAGGTCTTCCAGCCTCCACAAGCATGCCACCAACAACATCTACAGGCCTGCCACCACACAATTCTGCTTCCCCTTCTGTAATGACCCAACCAGACCCTAGTGTCTCAATCCCATCAAGCACTTCTGGGATTATGGCAAGAACACTTGTGAAAAAGCCTTTTCCTGGCCAGAAGAAACCGCTTGAAGCACTTGGTTCCTCACCTCCTCCTTCAAGTAAGAAACAAAAAACATCTGGGGGATCTGTAGAACAAAGCATTGAACAACTTAATGATGTCACTGCTGTTAGTGGAGTTGATCTTAGGGAAGAGGAAGAGCAGTTATTTTCAGGGCCTAAGGATGAAAGTCGAGTTTCAGAAGCATCTCGAAGAGCTGTGCAAGAAGAAGAGGAAAGACTGATTCTGCAGAGAACTCAATTGAATAAAAAATTGGTTGAGATTTTGGTCAAGTATGGCTTGAAGGGTATTGGTAATGATGTAGAGAGATGCTTGTCACAGTGTGTGGAGGAAAGAATGCGTGGACTAATAAGTAACCTGATTAGACTGTCAAAACTGCGAGTTGATTTTGAGAAGACAAGACACCAGACTGTTGTCACCTCCGATGTTCGGCAGCAAATCATGACAATAAATAGAAAATTAAGGGAAGAGTGGGAGAAAAAGCAGGCAGAAGCAGAGAAGCTTCGAAAAAGTAATGATATCGAGAATAATACTGGACTTGATGGTGACAAGGATGAAGGTCGTATTAAATCAACAAAGGTGAACAAGGAAGAGGATGAGAAGATGAGGACAAATGCTGCAAATGTTGCTGCCCGCGCTGCTGTTGGGGGAGATGATATGCTGTCGAAGTGGCAACTTATGGCCGAACAAGCCAGGCAGAAACGTGAAGGGGTGACAGACATGCCATCTGGCTCTCAATCAGCTAAAGATGTGAACCGCAAATCTTCATCAGCATCTGGAAGGAGTATGAAGGATAATCAAGAAGGGGATAAAAAAGGTCCAACTATTCCATCTTCAGGGGCTGCTAGAAAACATGGCAAAAATCATGTTCTCGCATCTCAAACTAGGGTAGCTCGAAGCATCTCTGTCAAGGATGTAATTGGAGTCCTGGAGAGGGAACCCCAGATGTCGAAATCCCCACTCATATATCGCTTGTATGAGAGAATTCATTCTGATGCCCCAGCTGAACAAGGTTAA 2667 0.4331 MDPSIVKLLEDDEDETMHSGVDLEAFQAALNRDIGGDGSASQPSGSDSALSQGINNSFSQAMPQWPTSSHDNRTDSQNQESKTAQQREQPSSEVELKQHGSLLEQPQHVASQVVNNPPFSQKQSQDEFHQSQNVQVSVQNSQMIGIQNSGKDPVQNHEIVQTHNPSNESQYAKLQQISNQQDTITEKPRSQMNQTPKQVPFGLLLPILIPQLPKDRAMQLQTLFTKLKKDEVPKDSFVRLMKGIVGDQMLRLAIAKVQQTRPNQGPAGQQPAVRMPTVGSGARQFNDPHALAQLHQRSMNATADQSRMTSSAVHNVGSSARDSQELDAKIESQGLQTSHLPTSSSNVGRQETERSSIHVQGLNKQQQQHLHFSSAYGSTGGNYNPFSGTTTSSTSSIKLQPHNSHLGQTPHQNTGPNHIGGVPQGLNVTSMPKLERHNSFSDPKRLPGGSVSSVGNNTTPQQTSNAWKPSINKEQNIEQGSSNQGIVKDEFSRGLPASTSMPPTTSTGLPPHNSASPSVMTQPDPSVSIPSSTSGIMARTLVKKPFPGQKKPLEALGSSPPPSSKKQKTSGGSVEQSIEQLNDVTAVSGVDLREEEEQLFSGPKDESRVSEASRRAVQEEEERLILQRTQLNKKLVEILVKYGLKGIGNDVERCLSQCVEERMRGLISNLIRLSKLRVDFEKTRHQTVVTSDVRQQIMTINRKLREEWEKKQAEAEKLRKSNDIENNTGLDGDKDEGRIKSTKVNKEEDEKMRTNAANVAARAAVGGDDMLSKWQLMAEQARQKREGVTDMPSGSQSAKDVNRKSSSASGRSMKDNQEGDKKGPTIPSSGAARKHGKNHVLASQTRVARSISVKDVIGVLEREPQMSKSPLIYRLYERIHSDAPAEQG 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0666 888 Pfam Transcription initiation factor TFIID component TAF4 family 581 875 IPR007900 GO:0005669|GO:0006352
Lal8g0666 888 MobiDBLite consensus disorder prediction 450 471 - -
Lal8g0666 888 MobiDBLite consensus disorder prediction 497 532 - -
Lal8g0666 888 MobiDBLite consensus disorder prediction 789 813 - -
Lal8g0666 888 MobiDBLite consensus disorder prediction 37 98 - -
Lal8g0666 888 Coils Coil 701 721 - -
Lal8g0666 888 CDD TAF4 576 874 IPR007900 GO:0005669|GO:0006352
Lal8g0666 888 MobiDBLite consensus disorder prediction 329 424 - -
Lal8g0666 888 MobiDBLite consensus disorder prediction 298 322 - -
Lal8g0666 888 MobiDBLite consensus disorder prediction 116 135 - -
Lal8g0666 888 PANTHER IP01149P-RELATED 39 880 - -
Lal8g0666 888 MobiDBLite consensus disorder prediction 560 576 - -
Lal8g0666 888 Gene3D Histone, subunit A 626 671 IPR009072 GO:0046982
Lal8g0666 888 ProSiteProfiles RST domain profile. 192 263 IPR022003 -
Lal8g0666 888 MobiDBLite consensus disorder prediction 545 576 - -
Lal8g0666 888 Coils Coil 614 634 - -
Lal8g0666 888 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 39 880 IPR045144 GO:0005669|GO:0006352
Lal8g0666 888 MobiDBLite consensus disorder prediction 493 532 - -
Lal8g0666 888 MobiDBLite consensus disorder prediction 779 847 - -
Lal8g0666 888 MobiDBLite consensus disorder prediction 298 471 - -
Lal8g0666 888 Pfam RCD1-SRO-TAF4 (RST) plant domain 195 259 IPR022003 -
Lal8g0666 888 MobiDBLite consensus disorder prediction 716 753 - -
Lal8g0666 888 MobiDBLite consensus disorder prediction 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0666 Lal-Chr8 4693819 4699921 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0666 8 4693819 4699921 Lal8g0666 8 4693819 4699921 ECH
Lal8g0666 8 4693819 4699921 Lal25g0599 25 4523596 4531092 LSH