Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0651 ATGGGCCAAGCAACTTCCACGGCCTCCGTCGCTTCCTGCGCCCAAGGCCACCGCTCCTCCAGCCACATAAAGTCCAGATCCACTGCCGTTTCGGTTTCTCCGATGATCAACAGCGTCAGTGATAACGGAGACAACGGTGAAGGAGATAACTGTGATTATATTTCCGATCTCCCCGACGAGTGTTTGGCTTCTGTTTTCCAGTCACTTAGTTCTGGCGATCGCAACCGCTGCTCTCTTGTTTGCCGGCGGTGGCTCCAGATCGAAGGTCAAAGCCGCCACCGTCTTTCTCTCGTCGCACAGACGGATCTCCTTCCATTCATTCCATCACTGTTCTCCCGATTCGACTCGGTCACGAAACTCGCTCTCAAATGCGACCGCAGATCGGTTAGCATATGTGACGACGCGCTTGTTCTCATCTCAGCGCGTTGTCCTAACCTCACGCGCCTCAAGCTCCGCGCGTGCCGAGAACTCACAGATTCAGGAATCGAAGCTTTCGCTAAGAACTGCAAGAGCTTGAAGAAGCTCTCGTGCGGATCTTGCTCATTCGGATCAAAAGGCATGAACTCTGTGCTCGATAATTGTGTTTATCTAGAAGAACTTTCCGTCAAGCGCCTTCGTGGAATCACCGACGCTGCCACTGCAGATCCTATTGGTCCTGGCGCCGCAGCGGCGTCGCTAAAGACAATTTGCTTAAAAGAACTCTACAACGGACACATTTTTGGTTCGTTGATTCTCGGAGCGAAGAATCTGAGAACCTTGAAGCTTTTCCGGTGCTCCGGCGATTGGGATAAGCTTTTTCAGGAAATGGTGAATAAAGTTACGAGTATTGTTGAGGTCCACCTTGAGAGGCTTCAGATTAGCGACATTGGCATGCAGTGTATTGCTAATTATTCCAATCTCGAAATTTTGCATCTTGTTAAGACACCAGAGTGCACAGATTTTGGTCTTGTTGCGATTGCTGAGCGGTGCAGGTTGTTGAGGAAGCTTCACATTGATGGATGGAAGGCAAATCGAATAGGCGATGCAGGTTTAATAGCAGTTGCCAAATGCTGCCCTAATTTGCAGGAACTGGTGCTTATTGCTGTTAACCCAACAAAATTGAGTTTGGAAATGTTGGCATCAAATTGTTTGAATCTCGAGCGGTTGGCTTTGTGTGGGAGTGATACTGTTGGTGACCCTGAGATATCGTGCATTGCCGCAAAATGTTTAGCGTTGAAGAAACTCTGTATTAAGAGTTGCCCTGTCTCTAATCGTGGAATGGACGCGTTGGCCAGAGGGTGTCCGAATTTGGTGAAAGTCAAGGTGAAGAAGTGTAAAGGTGTGACCTCTGAAGGTGGAGATTGTTTGAGATTGACTAGAGGGTCACTTGCTGTTAATTTAGATACTGGCGAAAATGAGAATCTGGATGCCAGTGCTAGTGATGGTGGAGTGCAAGAAAATGGTATAGAGTTTCCTCCAATGCCTAACCAAACAGCAGCAGCTGCAGGAGGATCAGCTAGTATTGCATCGAGAAGAACTAGTCAATCGGCTTCAATCAAATCTAGATTAGGGCTTTTGTCTGAGAGGATTTTGGTGGCTTGCAAATTGAGAAGATGGTCAGGTGGTAGCCGTAGGACTGGTGCTCGCCAAGTTAGAGACAGAGTGTAA 1647 0.4821 MGQATSTASVASCAQGHRSSSHIKSRSTAVSVSPMINSVSDNGDNGEGDNCDYISDLPDECLASVFQSLSSGDRNRCSLVCRRWLQIEGQSRHRLSLVAQTDLLPFIPSLFSRFDSVTKLALKCDRRSVSICDDALVLISARCPNLTRLKLRACRELTDSGIEAFAKNCKSLKKLSCGSCSFGSKGMNSVLDNCVYLEELSVKRLRGITDAATADPIGPGAAAASLKTICLKELYNGHIFGSLILGAKNLRTLKLFRCSGDWDKLFQEMVNKVTSIVEVHLERLQISDIGMQCIANYSNLEILHLVKTPECTDFGLVAIAERCRLLRKLHIDGWKANRIGDAGLIAVAKCCPNLQELVLIAVNPTKLSLEMLASNCLNLERLALCGSDTVGDPEISCIAAKCLALKKLCIKSCPVSNRGMDALARGCPNLVKVKVKKCKGVTSEGGDCLRLTRGSLAVNLDTGENENLDASASDGGVQENGIEFPPMPNQTAAAAGGSASIASRRTSQSASIKSRLGLLSERILVACKLRRWSGGSRRTGARQVRDRV 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0651 548 Gene3D Ribonuclease Inhibitor 88 468 IPR032675 -
Lal8g0651 548 SMART fbox_2 57 97 IPR001810 GO:0005515
Lal8g0651 548 Pfam Leucine Rich repeat 143 166 IPR001611 GO:0005515
Lal8g0651 548 SUPERFAMILY F-box domain 45 87 IPR036047 GO:0005515
Lal8g0651 548 PANTHER UNCHARACTERIZED 37 466 - -
Lal8g0651 548 MobiDBLite consensus disorder prediction 1 45 - -
Lal8g0651 548 ProSiteProfiles F-box domain profile. 51 87 IPR001810 GO:0005515
Lal8g0651 548 PANTHER F-BOX PROTEIN SKIP2 37 466 - -
Lal8g0651 548 SUPERFAMILY RNI-like 105 449 - -
Lal8g0651 548 MobiDBLite consensus disorder prediction 1 46 - -
Lal8g0651 548 Pfam F-box domain 54 87 IPR001810 GO:0005515
Lal8g0651 548 Gene3D - 53 87 - -
Lal8g0651 548 SMART LRR_CC_2 298 322 IPR006553 -
Lal8g0651 548 SMART LRR_CC_2 143 168 IPR006553 -
Lal8g0651 548 SMART LRR_CC_2 273 297 IPR006553 -
Lal8g0651 548 SMART LRR_CC_2 194 232 IPR006553 -
Lal8g0651 548 SMART LRR_CC_2 169 193 IPR006553 -
Lal8g0651 548 SMART LRR_CC_2 427 454 IPR006553 -
Lal8g0651 548 SMART LRR_CC_2 323 350 IPR006553 -
Lal8g0651 548 SMART LRR_CC_2 376 401 IPR006553 -
Lal8g0651 548 SMART LRR_CC_2 402 426 IPR006553 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0651 Lal-Chr8 4596820 4598466 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0651 8 4596820 4598466 Lal8g0651 8 4596820 4598466 ECH
Lal8g0651 8 4596820 4598466 Lal10g0832 10 15941715 15943352 LSH