Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0647 ATGGAATCAGCAACGGAACCTTGTTCTGTGAAGGTCGCGGTTCATGTTAGACCTCTAATCAGTGAAGAGAAGCTTCAAGGTTGCAAAGATTGTGTAACCGTCGTTAACGGGAAGCCTCAGGTACAAATTGGCGCCCGTTCCTTTACATTTGATCATGTCTATGGGAGCACTGCATCTCCCTCATCAGCCATGTTCGAGGAATGTGTTGCTTCCCTTGTTGATGGCTTGTTCCAAGGATATAATGCTACTGTTCTTGCATATGGCCAGACTGGTTCTGGGAAAACATACACCATGGGCACTGGCGTTAAAGATGGTTGCCAAACAGGAATAGTTCCTCAAGTTATGAGTGCCTTATTTAACAAAATTGAGACCTTAAAGCATCAGATTGAATTTCAATTGCATATTTCCTTTATCGAGATTCTTAAAGAAGAAGTAAGGGACTTGCTGGATCCATCCTCTACGAGCAAATTAGAAAATGCAAATGGACATGCAGGAAAAGTGAATGTACCTGGGAAACCGCCAATACAAATTCGTGAGACGTCAAATGGTGTCATTACCCTAGCTGGATCTACTGAAGTCAGTGTTACAACACTAAAAGAAATGGCTGCTTGCCTGGAACAAGGATCATTAAGTAGAGCAACTGGGAGCACAAATATGAACAACCAATCCAGTCGATCACATGCCATCTTCACTATCACATTAGAGCAAATGCGGAAGCTCAGTAGTGAGATCGGTGATTCCATGAATGAAGACTATCTTTGTGCCAAGTTGCACTTAGTAGATCTTGCTGGATCAGAACGAGCTAAAAGAACGGGGTCTGATGGTGTGCGTTTTAAGGAAGGAGTTCACATTAACAAAGGCCTTCTAGCACTTGGCAATGTGATTAGTGCACTTGGTGATGAAAAGAAGAGAAAAGAAGGTGTTCATGTTCCTTATAGAGATAGTAAACTTACTAGGCTTTTGCAGGATTCACTCGGAGGTAACAGCAGAACTGTTATGATAGCCTGCATAAGTCCTGCTGATATTAATGCTGAGGAAACCTTGAATACGTTGAAGTACGCAAATCGTGCTCGCAATATCCAAAATAAGCCCATTGTCAATAGAGATCCTATGTCCAATGAGATGCTAAAAATGCGACAACAACTAGAATGTCTGCAAGCAGAACTTTGTGCTCGTTCTGGTGGCACTTTTGAGGAAATGCAGGTCCTCAAGGAAAGGATTGCTTGGCTTGAAACAGCTAATGAGGATCTTTGCCATGAACTTCATGAATACCGTAGTAGATGCTCCGTTGTAGAACAATGTGAAAAGGATTCTTATAATGGTAGCACGTATAAGGCGAAGACTGATGGGCTAAAGAGGGGCTTACCTATCACATCCTCTGATTACCCAATGAGTGAAACAACAGGGGATTCAATGGAAATTGAAGAAGTAACAAAAGAGTGGGAACACACACTTCTTCAAAATAGTATGGATAGAGAGTTACATGAATTGAATAAGCGCTTGGAGCAGAAAGAGTCCGAGATGAAGCTTTTTGGAGTATCTGATGCTGAAACACTCAAGCAGCATTTTGGAAGGAAGATAATGGAACTGGAGAATGAGAAGGGAGCGGTGCAGCGAGAGAGGGATCATCTTTTGGCTGAAGTTGAAAATCTTGCCAATTCTGATGGACAAACACAGAAATCAGAGGATATTCATGCTCAAAAATTGAAAGCACTTGAAGCACAGATTCTGGATCTGAAGAAGAAACAGGAGAGCCAGGTTCAGCTTATGAAGCAAAAGCAAAAAAGTGATGAAGCAACAAAGAAACTGCAAGATGAAATACAATCTATAAAAGCTCAGAAGGTTCAATTGCAACATAGAATAAAACAAGAGGCAGAACAGTTTCGACAGTGGAAGGCTTGTAGAGAGAAAGAGATGCTGCAATTACGGAAAGAGGGAAGAAGAAATGAGTTTGAAAGGCATAAGCTGCAAGCTTTAAATCAGCGCCAGAAAATGGTTCTTCACAGAAAGACAGAAGAAGCTGCAATCGCCACCAAGAGGTTAAAGGAGTTGTTAGAAGCTCGTAAATCCTCCAGCCGGGACAATTCAGTTACAATGAACGGAAGTGGAACAAATGGACAGAGCAACGAGAAGTCCTTACAACGATCAATTGATCACGAGCTAGAAGTCATGGTGAAGGAGCATGAAGTTCGTTTTGAGTATGAGAAGCAGAGCCAAATGCGTGCTGCCCTCGGAGAGGAGTTAGCCTTGTTGAAGCAAGTGAATGAGTTAGCTGCCAAGGGTCTCAGTCCTCCAAGAGGAAAGAATGGATTTGCTAGAGCTTCCTCCATGCCACCAAATGCAAGAATGGCCAGAATAGCTTCACTTGAGAACTTGCTAAGCATATCATCTAATTCGCTTGTGGCAATGGCTTCTCAACTTTCTGAGGCAGAAGAACGAGAACGGGCCATCGCTAGTCGTGTACGCTGGAACCAGTTGCGCTCAATGGGAGAAGCCAAGAATTTGCTTCAATATATGTTCAATTCTGTTGCAGATGACAGGTGCCAACTGTGGGAGAAGGACATGGAAAACAGGGAAATGAAAGATCAAATCAAAGAACTTGTTGGTCTATTACGACAAAGTGAGATTAAGAGGAAAGAAATTGACAAGGAGCTAAAAGTGAGGGAGCAAGATGCTGCAACCACATTGACTACAACAGCTTCTGGAAACCCTCCAAATTCATTGAAACATTATGCTGAAGATATGAATGGACCTTTATCTCCAGAGTCAGTCTCAATACTGAAACAGTGCAAATATACGCCAGGCATTGCTAATGGCAATGTGAGGGAATCGGCAGCATTTATAGATCAGAGTAGAAGGATGGTACCCATGGGGCAACTGTCAATGAAAAAGCTAGCAATGGTAGGACAAGCTTCTGGGAAGTTATGGAGGTGGAAAAGAAGCCATCATCAGTGGCTACTCCAGTTCAAGTGGAAGTGGCAAAAGCCATGGAGACTTTCGGAATGGATTCGACACAGTGATGAGACAATCATGAGAGCGAAGCCACGTTCACAAGCTTTGCCGCAAATCTTGTGA 3075 0.428 MESATEPCSVKVAVHVRPLISEEKLQGCKDCVTVVNGKPQVQIGARSFTFDHVYGSTASPSSAMFEECVASLVDGLFQGYNATVLAYGQTGSGKTYTMGTGVKDGCQTGIVPQVMSALFNKIETLKHQIEFQLHISFIEILKEEVRDLLDPSSTSKLENANGHAGKVNVPGKPPIQIRETSNGVITLAGSTEVSVTTLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSSEIGDSMNEDYLCAKLHLVDLAGSERAKRTGSDGVRFKEGVHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPIVNRDPMSNEMLKMRQQLECLQAELCARSGGTFEEMQVLKERIAWLETANEDLCHELHEYRSRCSVVEQCEKDSYNGSTYKAKTDGLKRGLPITSSDYPMSETTGDSMEIEEVTKEWEHTLLQNSMDRELHELNKRLEQKESEMKLFGVSDAETLKQHFGRKIMELENEKGAVQRERDHLLAEVENLANSDGQTQKSEDIHAQKLKALEAQILDLKKKQESQVQLMKQKQKSDEATKKLQDEIQSIKAQKVQLQHRIKQEAEQFRQWKACREKEMLQLRKEGRRNEFERHKLQALNQRQKMVLHRKTEEAAIATKRLKELLEARKSSSRDNSVTMNGSGTNGQSNEKSLQRSIDHELEVMVKEHEVRFEYEKQSQMRAALGEELALLKQVNELAAKGLSPPRGKNGFARASSMPPNARMARIASLENLLSISSNSLVAMASQLSEAEERERAIASRVRWNQLRSMGEAKNLLQYMFNSVADDRCQLWEKDMENREMKDQIKELVGLLRQSEIKRKEIDKELKVREQDAATTLTTTASGNPPNSLKHYAEDMNGPLSPESVSILKQCKYTPGIANGNVRESAAFIDQSRRMVPMGQLSMKKLAMVGQASGKLWRWKRSHHQWLLQFKWKWQKPWRLSEWIRHSDETIMRAKPRSQALPQIL 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0647 1024 Pfam Kinesin motor domain 16 360 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal8g0647 1024 MobiDBLite consensus disorder prediction 691 712 - -
Lal8g0647 1024 Gene3D Kinesin motor domain 2 388 IPR036961 -
Lal8g0647 1024 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-LIKE PROTEIN 1 1023 - -
Lal8g0647 1024 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 1023 - -
Lal8g0647 1024 SMART kinesin_4 7 368 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal8g0647 1024 Coils Coil 562 627 - -
Lal8g0647 1024 MobiDBLite consensus disorder prediction 686 713 - -
Lal8g0647 1024 MobiDBLite consensus disorder prediction 156 175 - -
Lal8g0647 1024 MobiDBLite consensus disorder prediction 892 906 - -
Lal8g0647 1024 PRINTS Kinesin heavy chain signature 79 100 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal8g0647 1024 PRINTS Kinesin heavy chain signature 217 234 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal8g0647 1024 PRINTS Kinesin heavy chain signature 256 274 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal8g0647 1024 PRINTS Kinesin heavy chain signature 310 331 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal8g0647 1024 ProSitePatterns Kinesin motor domain signature. 255 266 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lal8g0647 1024 ProSiteProfiles Kinesin motor domain profile. 9 360 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal8g0647 1024 CDD KISc_KIF4 8 361 - -
Lal8g0647 1024 Coils Coil 667 687 - -
Lal8g0647 1024 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 391 IPR027417 -
Lal8g0647 1024 MobiDBLite consensus disorder prediction 892 912 - -
Lal8g0647 1024 Coils Coil 513 547 - -
Lal8g0647 1024 Coils Coil 487 507 - -
Lal8g0647 1024 Coils Coil 857 877 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0647 Lal-Chr8 4560200 4572614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0647 10 380 Calmodulin-binding Proteins AT5G65930 34.667 8.23e-56 209
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0647 8 4560200 4572614 Lal8g0647 8 4560200 4572614 ECH
Lal8g0647 8 4560200 4572614 Lal21g0213 21 1393775 1404848 PCT
Lal8g0647 8 4560200 4572614 Lal4g0130 4 799875 811321 PCT
Lal21g0213 21 1393775 1404848 Lal8g0647 8 4560200 4572614 PCT
Lal4g0130 4 799875 811321 Lal8g0647 8 4560200 4572614 PCT