Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0646 ATGATGGACTCTGCTCTTGTTCTGAATTTTGTGAACACCACATTGGATTGGGTGAAAATTGCTCTTGGTGCTCCTTCTGCACGAGCTGTAGTTTTTGGATATCATATCGGTGGACATTTATTTGTCGAAGTTCTTCTCTTGGTGGTCATCCTTTTCTTGCTTTCCCAGAAAAGTTACAAGCCTCCTAAACGACCCTTAACAAACAAGGAGATAGACGAGTTATGTGATGAATGGATTCCAGAACCTCTTATTCCTTCTCTTAATGAAGAGATGCACTATGAACCACCAGTGCTGGAGAGTGCTGCTGGACCACATGCCATAATTAATGGTAAAGAAGTTGTCAACTTTGCTTCAGCAAACTATCTTGGGTTGATAGGTCATCAAAAGTTACTTGACTCATGTTCTTCTGCTTTAGAGAAATATGGTGTTGGCTCTTGTGGTCCCCGTGGGTTTTATGGAACAATTGATGTCCATCTTGACTGTGAAGCAAGAATAGCAAATTTTTTGGGAACCCCTGATTCAATTCTATACTCTTACGGACTCTCCACCATGTTCAGTGCGATTCCTGCATTCTCTAAAAAAGGAGATATAATTGTAGCGGACGAGGGAGTCCACTGGGGAATACAGAATGGCCTTTATCTCTCAAGAAGCACGGTGGTGTATTTTAAGCATAATGACATGGACTCTTTAAGAAATACTTTAGAGAACATTACTTCCAAAAATAAGCGGATCAAGAAATTGAGGCGTTATATTGTTGTTGAAGCTGTCTACCAGGTAGATCTTGTCTATAATGCATATTATGTATTCTATCTGCTTCGCCTTCAACCATTATCTTCAAAAGAAGCTGCTTTGACTGCTTGCTGCTTCTTGCTTCTTGCTACTTGCGACAATTCTGGTCAAATAGCACCCTTAGATGAGATCATTAAGTTGAAGGAGAAATATCGTTTTCGTGTTTTGCTGGACGAGAGCAACTCATTTGGGGTGCTTGGAATTTCTGGAAGAGGTCTCACTGAACACTATGGAGTTTCGCCTGAGAAGTTAGATATTATAACTGCTGCTATGGGACATGCATTGGCCTCAGAAGGAGGATTCTGCACTGGAAGTGCTAGAGTTATAGATCACCAACGATTGAGTAGTTCTGGATATGTCTTCTCTGCTTCTTTGCCTCCATATCTTGCTAGTGCCGCAATCACAGCTATTGACATCCTGGAGGAAAATCCTTATCTGATAACAAAGCTAAAGAACAACATTGCTGCATTATGGAGAGGATTGTCAAACTTAACAGGCTTCACAATCGCGAGTAATCCAGAGTCACCAATTGTTTATTTGAGATTGGAGAAATCAACAGGCTCCACAAAAGACGACTTACGTCTGCTTGAAAATATTACTCAGCGCGTTTTGAAAGAAGATTCTGTATTTGTGGTGCCTTCCAAAAGATCAACGCTAGACAACTGCCATTTACCTTTAGGAATTAGATTATTTGTTTCTGCAGGGCATTCAGAGTCTGATCTTCACAAGGCATCTGAATCATTGAAAAGGGTTGCAGCATTAGTTCTGGGTGGTCACAATTGA 1572 0.4084 MMDSALVLNFVNTTLDWVKIALGAPSARAVVFGYHIGGHLFVEVLLLVVILFLLSQKSYKPPKRPLTNKEIDELCDEWIPEPLIPSLNEEMHYEPPVLESAAGPHAIINGKEVVNFASANYLGLIGHQKLLDSCSSALEKYGVGSCGPRGFYGTIDVHLDCEARIANFLGTPDSILYSYGLSTMFSAIPAFSKKGDIIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLENITSKNKRIKKLRRYIVVEAVYQVDLVYNAYYVFYLLRLQPLSSKEAALTACCFLLLATCDNSGQIAPLDEIIKLKEKYRFRVLLDESNSFGVLGISGRGLTEHYGVSPEKLDIITAAMGHALASEGGFCTGSARVIDHQRLSSSGYVFSASLPPYLASAAITAIDILEENPYLITKLKNNIAALWRGLSNLTGFTIASNPESPIVYLRLEKSTGSTKDDLRLLENITQRVLKEDSVFVVPSKRSTLDNCHLPLGIRLFVSAGHSESDLHKASESLKRVAALVLGGHN 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0646 523 Gene3D Aspartate Aminotransferase, domain 1 106 509 IPR015422 GO:0003824
Lal8g0646 523 PANTHER CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE 7 520 - -
Lal8g0646 523 PANTHER LONG CHAIN BASE BIOSYNTHESIS PROTEIN 1-LIKE 7 520 - -
Lal8g0646 523 Pfam Aminotransferase class I and II 112 511 IPR004839 GO:0009058|GO:0030170
Lal8g0646 523 Gene3D - 127 406 IPR015421 GO:0003824
Lal8g0646 523 Coils Coil 227 247 - -
Lal8g0646 523 SUPERFAMILY PLP-dependent transferases 87 518 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0646 Lal-Chr8 4545918 4553511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0646 2 375 Acyl Lipid Metabolism Gene Families AT4G36480 70.053 0.0 533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0646 8 4545918 4553511 Lal25g0596 25 4495616 4503725 LSH
Lal8g0646 8 4545918 4553511 Lal10g0826 10 15896309 15903778 LSH