Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0644 ATGAAGGATTATTGGATACATGTACATGTTGCAGTGGTGGCTGCCTCAATAGGAGGTGTTTTAACACTTTTGATGGTTTTCATATGGCGTTGGTGTACTGATAAAAAGAAAGACCACAAAAACTTTGTTGAACCAAAAAGTCTGAGAAGAATGGAGATCTTCCAATCAAGAATTTCTAGACTTCACCAATTTGAGCAAAGTAGTAGTAAGGACAACATCAAAGACAATTTTTATGTTCTTCAAGGAAAGAAACATTTATTCAATTGGTCTGATCATCCTTACTTAGCTGCTGATGCTGTAGAAAATGGTTGGTCTAGATTTGCTTTCATGGATTACAAAAGTTGCATGTCATCATCAACAACTTCAAAGAGATCAACCCTTTTAGGAGTATATGCAGGTGATGATAATGGAAAAGGAAATGAAGTTGGAATAAGTTGGGAAATGTGTCAAGGATCAAATGATTTGATGCAGAAGATAAGACTCAATTCTGGGTTAAAAAGAGTTCAATATCCAAAAAACTCTTCTATGAGTATTGCTTCTGTTATTAGGACTTCTCTACCTCTTCCTGGCCCTCCTTTTGGAAACTATGTGTTCCCCCAAGAGGCCTATTTTGAAATCACCATCTTGTATTGTAATGTTGGTTATCATGAATTGGTTGAAAAGAGAAGAGAAGGAGAGAAAACTAAGCTTCTCATTGAAAATGGTTCAAGTGGTGAGGGTAATTTGGATAATGCTGATGAAATGAAAGTTGGTGGTAAAGACAATGGGAAGAGTGGATCTGTGATGTTCTCATTGGGGTTAACAGCAGGAGGAGCTTTTCCTATGAGAGTTCCTGGTAGCTACCCTGGAAGCATTGGTTTCAACTCCAATGGTTCTATCTTTTTTGATGGTAAAAAAGTTGTATCCGAATCAGAGAATGCAGAATGGGTTGAAACTGATAGAGTAATTGGTTGTGGATTTGATCCAAAGCAGAAAAAGGTTTTCTTCACATTAGACTCAGAATTGGTGCATGTCTTCCACTGTCAATTAGAAGAATTTGGTACTCCACTACGTCCAACCTTAGCTGCAAACATAGACATTCTGGTTTTAGTTAATTTTGGACAAAGTGCATTCAAATATGTACCTGCAAATGCACAAAGAACACCAAATCCATGTTTTATAGCCCCACTAGTAAATTCCCCTCCTACCATCTTTGCCTATGATGAAGACAACAATGATTCTCAGAGGCTTAGTGGTTCTACAACTACATTTGATTATGATGAGGGTTCTGATGAACTATTTGAAATTGTGTTGGATGTATCTGCAAATTTTCCACACATCCCACAAAGTGTAAGATAA 1338 0.3714 MKDYWIHVHVAVVAASIGGVLTLLMVFIWRWCTDKKKDHKNFVEPKSLRRMEIFQSRISRLHQFEQSSSKDNIKDNFYVLQGKKHLFNWSDHPYLAADAVENGWSRFAFMDYKSCMSSSTTSKRSTLLGVYAGDDNGKGNEVGISWEMCQGSNDLMQKIRLNSGLKRVQYPKNSSMSIASVIRTSLPLPGPPFGNYVFPQEAYFEITILYCNVGYHELVEKRREGEKTKLLIENGSSGEGNLDNADEMKVGGKDNGKSGSVMFSLGLTAGGAFPMRVPGSYPGSIGFNSNGSIFFDGKKVVSESENAEWVETDRVIGCGFDPKQKKVFFTLDSELVHVFHCQLEEFGTPLRPTLAANIDILVLVNFGQSAFKYVPANAQRTPNPCFIAPLVNSPPTIFAYDEDNNDSQRLSGSTTTFDYDEGSDELFEIVLDVSANFPHIPQSVR 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0644 445 Pfam SPRY domain 260 357 IPR003877 GO:0005515
Lal8g0644 445 PANTHER RAN BINDING PROTEIN 9-RELATED 7 437 - -
Lal8g0644 445 SUPERFAMILY Concanavalin A-like lectins/glucanases 263 373 IPR013320 -
Lal8g0644 445 Gene3D - 138 381 IPR043136 -
Lal8g0644 445 PANTHER SPLA/RYANODINE RECEPTOR (SPRY) DOMAIN PROTEIN 7 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0644 Lal-Chr8 4535182 4538931 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0644 8 4535182 4538931 Lal8g0644 8 4535182 4538931 ECH
Lal8g0644 8 4535182 4538931 Lal21g0212 21 1382780 1385197 PCT
Lal21g0212 21 1382780 1385197 Lal8g0644 8 4535182 4538931 PCT