Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0642 ATGGGAAGCATGAAGGTTCATCAGTTCACACGTGGAGGATTCTGGGAGCACGAACCCCTCTCTCTCTCACTTGGCTGCAAGCGCTTACGCCCTCTTGCTCCCAAACTTTCTAACTCCAACATCACTACTACTACTGTTACTCCCTTCGATATCAAGAGCTTTATCAAACCTCAAAGTGGATCCACAAAACTTGGATCCTCATATGATGATAATAAGAATGATCCACCTTCACCAAAGGACCAGGTGGAAACGCATCCAGGAGGGACAAGGTGGAATCCAACGCAAGAACAGATAAGAATATTGGAGATGCTGTATAGAGGAGGAATGCGAACTCCAAATACTCAGAAGATAGAGCAAATCACTGTCCAGCTTAGCAAGTACGGAAAGATAGAAGGGAAAAATGTATTCTATTGGTTCCAAAACCACAAAGCACGCGAGAGACAAAAGCAGAAACGCAAAAGTCTTGGCCTTCCTCTTAGTCCTCGCACTCCCACCTTTACCAGTAGTATTACTTTTGAGACTACAATGGGGGAAGTAGATCAGGAAGATAGTCCATACAAGAAGTGTAGGAGCATGGCATTTGAGTATTTGGAAGAACAAAACTGGTTATCCTGCAAAGAGAAGGAACATAAAACTCTGGAGCTTTTTCCATTGTACCCGGAATTAGGCAGATGA 675 0.4385 MGSMKVHQFTRGGFWEHEPLSLSLGCKRLRPLAPKLSNSNITTTTVTPFDIKSFIKPQSGSTKLGSSYDDNKNDPPSPKDQVETHPGGTRWNPTQEQIRILEMLYRGGMRTPNTQKIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRKSLGLPLSPRTPTFTSSITFETTMGEVDQEDSPYKKCRSMAFEYLEEQNWLSCKEKEHKTLELFPLYPELGR 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0642 224 Gene3D - 88 155 - -
Lal8g0642 224 SUPERFAMILY Homeodomain-like 85 154 IPR009057 -
Lal8g0642 224 MobiDBLite consensus disorder prediction 57 94 - -
Lal8g0642 224 CDD homeodomain 89 150 IPR001356 GO:0003677
Lal8g0642 224 MobiDBLite consensus disorder prediction 57 72 - -
Lal8g0642 224 Pfam Homeodomain 89 148 IPR001356 GO:0003677
Lal8g0642 224 PANTHER WUSCHEL-RELATED HOMEOBOX 4 4 221 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Lal8g0642 224 ProSiteProfiles 'Homeobox' domain profile. 84 149 IPR001356 GO:0003677
Lal8g0642 224 SMART HOX_1 86 153 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0642 Lal-Chr8 4511154 4513347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0642 4 174 Wox Gene Family AT1G46480 59.893 1.22e-61 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lal8g0642 Homeodomain 1.5e-18 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0642 8 4511154 4513347 Lal8g0642 8 4511154 4513347 ECH
Lal8g0642 8 4511154 4513347 Lal25g0595 25 4473831 4476874 LSH