Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0640 ATGAGAGAACTAGTAGAACCTCACTCTCAACGTCCCACACTCCCACCCGGTTGCCGGTTCCACCCTTCCGAACACCTTCTCCTCCGTTACTACCTAACCAACAAGAACACCCCCAATAACGTTACCGGTTACCGGCAAGATGATTTCTACGGTTCTGATTTAATCACAGACCTTGATCTCTACGGTTATGACCCTCTTGAATTACCTGAAACCGCGTGCTTTTCGTACGGTTACGGAGGGAGGAAGAGCCACTTGTACTGTTATACGGTTAGGGTTTTGAAGGAACGTAGGAGAAGGAAGGTTAGAAGCGGTTTTTGGGTCAAAAATGGAAGGGTTAGGGACATTTTCGGTAATGGAAGTGAGGACGCAGTTTTAGGAACCCGAACCCGGTTCGTTTTCTATGTCGGGAATTCGATGAGAAACGCTACCAGAACGGATTGGATGCTGTATGAGTATGCATTGGTTAACCATCTTCTGGCTACTTTTGTCCTTTGCCGTGTATTTAAAAAGCCTCATCGTAAGAATGGTTTGTCAGAAATTGGTTTTTCTTGTGCAGAAGAAAGTAAATCAGGATCAGCAGTACGTCACATTGGTATTCAGCATGATGGCAATGTTAAATCTGATATTGTTGAAGCTAAAGTATGTGATGATAGCTCCATTGGCAGAATGAATGGAATCTCAGTCCATCCGGTAAGATGTGCTAGCGGACAAGATGGTCATCAACTTATGACCGCACCTGTTTCTGTTGCTAATTTCCAACACCATGTTGGTCCTGAGGGAAATCAGCAGGAAAGGCTTTCTGGACTTCCTAGCGGTAATGCGATGTTCATTGAAGCTGTGACATCTCAGCAACTTTTACTTTCCATTCTAGAGGAGGATTTCATTGAGCTGAATGATCTAGTATGA 906 0.4437 MRELVEPHSQRPTLPPGCRFHPSEHLLLRYYLTNKNTPNNVTGYRQDDFYGSDLITDLDLYGYDPLELPETACFSYGYGGRKSHLYCYTVRVLKERRRRKVRSGFWVKNGRVRDIFGNGSEDAVLGTRTRFVFYVGNSMRNATRTDWMLYEYALVNHLLATFVLCRVFKKPHRKNGLSEIGFSCAEESKSGSAVRHIGIQHDGNVKSDIVEAKVCDDSSIGRMNGISVHPVRCASGQDGHQLMTAPVSVANFQHHVGPEGNQQERLSGLPSGNAMFIEAVTSQQLLLSILEEDFIELNDLV 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0640 301 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 11 301 - -
Lal8g0640 301 SUPERFAMILY NAC domain 10 170 IPR036093 GO:0003677|GO:0006355
Lal8g0640 301 PANTHER NAC DOMAIN-CONTAINING PROTEIN 21/22-LIKE ISOFORM X1 11 301 - -
Lal8g0640 301 Pfam No apical meristem (NAM) protein 15 154 IPR003441 GO:0003677|GO:0006355
Lal8g0640 301 ProSiteProfiles NAC domain profile. 14 170 IPR003441 GO:0003677|GO:0006355
Lal8g0640 301 Gene3D NAC domain 24 175 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0640 Lal-Chr8 4498162 4499678 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0640 11 190 NAC Transcription Factor Family AT5G64060 32.990 9.20e-21 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal8g0640 NAM 3e-18 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0640 8 4498162 4499678 Lal8g0640 8 4498162 4499678 ECH