Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0634 ATGGACGGTTACGATGGCACAGTTAGGCTCGGAGCCATTAACTTGAAGCATGATCGCGCCTCCGATTTTGACTCCGGCTCCGACGTGTCGGTTTCGTCGCCGGTTACTCGACAGAAAGCTGCCGCCGCTAAACAGTTCATAGAGAATCATTACAAAAACTATCTCCAAGGATTGCAGGATCGTAAAGACAGACGTAGAGCGCTTCAAAGGAAAGTGCAAGAAGCACAAATACCGGTTGAGGAGCAGGAGGAAATGATGAGGAGTTTGGAGCGCCGAGAAACTGAATACATGAGGCTTCAGAGACGTAAAATTGGAATTGATGACTTTGAACAATTAACAGTAATTGGTAAAGGTGCTTTTGGTGAGGTGAGGTTATGCCGTGCTAAAAATACTGGAGAGATTTTTGCCATGAAGAAATTGAAGAAGTCAGAGATGCTTAGCCGCGGACAGGTGGAACATGTTCGGTCTGAGAGGAACTTGCTGGCAGAGGTTGATAGTAGATGTATAGTAAAACTCCATTACTCATTCCAAGATTCAGATTCCCTATATCTCATCATGGAGTACTTACCTGGTGGTGACATTATGACATTGTTAATGAGGGAAGATATTCTTTCTGAAGATGTTGCTCGCTTCTACATAGCTGAAAGCATTCTTGCCATTCACTCAATACATCAACACAACTATGTGCATAGGGATATAAAACCGGATAACCTGATACTGGATAAAAATGGCCATTTGAAGCTTTCAGACTTTGGCTTATGTAAGCCTCTCGATGATAAATATTCATCAATCTTATTGGAAAGTGAAGATTTAACTAGTCAAGAATCAACCAGCGAACCTGAAGGATATTCTGTCTCCCCTTGGTCGATGCCAAAGGAGCAATTACAACAGTGGAAACGTAATCGCCGTGCACTGGCATTTTCAACTGTCGGAACTCTTGATTATATGGCACCTGAAGTTTTGCTCAAGAAGGGATATGGAATAGAATGTGATTGGTGGTCTCTTGGGGCGATCATGTACGAGATGCTTATTGGGTATCCTCCCTTTTGTTCTGATGATCCAAGGATGGCCTGCCGTAAGATTGTTAACTGGAAAACATGCTTGAAATTTCCTGAAGAACCCAAGATATCACCTGAAGCGAAGGATCTGATCTGTCACTTACTGTGTGATGTTGACACAAGACTAGGAACTAGAGGAGTAGAAGAAATTAAGGATCATCCTTGGTTCAAGTCTGTTCAGTGGGACATGCTTTATGAATTGGAAGCAGCCTATAAACCTACGGTCATTGGAGACTTGGACACACAAAACTTTGAGAAGTTTCCTGATTTAGGTGGCCCACCATGCACACCAGCGACTATAGGACCTTGGCGGAAGATGTTGACATCCAAAGACACCAACTTTATAGGATATACTTATAAGAAGTCAGACATCTTAAATTCACTTGAAAGTTCAGATGCAGATGTCAGACTAAATGGCTCATCAAGCAATCCTTCCTTGATTTCCTTGTTAGGTAGGATTGATTTGCAAGATAATGTCATTCCAGAAAGAAAGTGA 1554 0.4234 MDGYDGTVRLGAINLKHDRASDFDSGSDVSVSSPVTRQKAAAAKQFIENHYKNYLQGLQDRKDRRRALQRKVQEAQIPVEEQEEMMRSLERRETEYMRLQRRKIGIDDFEQLTVIGKGAFGEVRLCRAKNTGEIFAMKKLKKSEMLSRGQVEHVRSERNLLAEVDSRCIVKLHYSFQDSDSLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESILAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLDDKYSSILLESEDLTSQESTSEPEGYSVSPWSMPKEQLQQWKRNRRALAFSTVGTLDYMAPEVLLKKGYGIECDWWSLGAIMYEMLIGYPPFCSDDPRMACRKIVNWKTCLKFPEEPKISPEAKDLICHLLCDVDTRLGTRGVEEIKDHPWFKSVQWDMLYELEAAYKPTVIGDLDTQNFEKFPDLGGPPCTPATIGPWRKMLTSKDTNFIGYTYKKSDILNSLESSDADVRLNGSSSNPSLISLLGRIDLQDNVIPERK 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0634 517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Lal8g0634 517 Coils Coil 72 102 - -
Lal8g0634 517 SUPERFAMILY Protein kinase-like (PK-like) 84 461 IPR011009 -
Lal8g0634 517 ProSiteProfiles Protein kinase domain profile. 109 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0634 517 SMART pkinase_C_6 410 474 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lal8g0634 517 CDD STKc_NDR_like 107 473 - -
Lal8g0634 517 Pfam Protein kinase C terminal domain 430 472 IPR017892 GO:0004674|GO:0005524|GO:0006468
Lal8g0634 517 SMART serkin_6 109 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0634 517 Gene3D Phosphorylase Kinase; domain 1 428 438 - -
Lal8g0634 517 Gene3D Transferase(Phosphotransferase) domain 1 308 427 - -
Lal8g0634 517 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 7 506 - -
Lal8g0634 517 Gene3D Transferase(Phosphotransferase) domain 1 193 260 - -
Lal8g0634 517 PANTHER SERINE/THREONINE-PROTEIN KINASE 7 506 - -
Lal8g0634 517 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
Lal8g0634 517 ProSiteProfiles AGC-kinase C-terminal domain profile. 410 482 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lal8g0634 517 Pfam Protein kinase domain 109 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0634 517 Gene3D Phosphorylase Kinase; domain 1 78 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0634 Lal-Chr8 4413689 4420950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0634 1 511 AGC Kinase Gene Family AT5G09890 77.626 0.0 834
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Lal8g0634 Pkinase 3.3e-65 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0634 8 4413689 4420950 Lal8g0634 8 4413689 4420950 ECH