Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0626 ATGTCTTCTTCCACAAGGGGTGAACAACACCAAACGGTTCCGCTTTCGGTGTTGCTGAAACGTGAATTGTTGAGCGAGAAGATTGAGAGGCCTGAGATTGTGCATGGTCAAGCATGCCATAGCAAGAAAGGAGAGGATTTCACTCTCCTCAAGACCGATCGCCAAAGGCTCGTTGGCGATGGAGTCTCTACATATTCTGTTTTTGGGCTGTTTGATGGACACAATGGATCTGCTGCTGCTATTTATACTAAGGAGAATCTTCTAGATAATGTTTTAAGTGCAATTCCACCAGATCTTAATAGAGATGAGTGGGTAGCAGCGTTGCCTAGGGCTTTGGTTGCAGGCTTTGTCAAAACTGATAAAGATTTTCAACAGAAAGCACAAAAATCAGGAACAACTGTAACCTTTGTGATTGTAGACGGATGGGTTGTAACAGTTGCATCAGTTGGCGATTCCCGTTGTGTTCTTGAATCTTCTGAAGGTGGGATTTATTATTTGTCAGCAGATCATAGGCTTGAAACAAATGAAGAGGAGAGGGTGCGCATCAGATCTAGTGGGGGCGAGGTTGGTCGGCTAAATACGGGGGGAGGAGCAGAGGTTGGTCCTTTGAGATGTTGGCCCGGTGGCTTGTGTCTTTCACGATCTATTGGTGATATGGATATTGGCGAATTTATTGTCCCTGTACCATATGTAAAGCAAGTGAAGCTGTCCACTGGTGGAGGCAGGCTTGTTATCTGTAGCGATGGTGTTTGGGATGCACTATCTGCAGAAGTCGCCCTTGATAGTTGTCATGGCATGCCAGCAGAGGCTGCAGCACCACATGTTGTTAAAGAAGCTGTACAAGCAAAAGGACTTAGAGATGATACAACATGCATCGTTGTTGATATATTGCCTCAAGAGAAGCCACCTACTTCTGTTCCACACACAAAGAAGCCAGTTAAAGTAATGCTCAAGTCCATGTTTCGTAAAAAGTCATCTGAATCATCTTATATTGACAAGGAATACTTGGAGGCCGATGTGGTTGAGGAACTGTTCGAGGAAGGATCTGCAATGCTTTCAGAGAGGTTAGATACAAAATATCCACTCTGCAACATGTTCAAGTTGTTTATGTGTGCAGTGTGTCAAGTAGAGATAAAACCAGGTGAGGGTATTTCAATACACGAGGGTGAACCCATCCCAGGAAAATCGCGTCCTTGGGATGGACCTTTTCTTTGTGCAAGTTGTCAAGAGAAGAAAGAAGCCATGGAAGGGAAAGGAGTGTCAGGTAGAGTTAGCAGCGGAAGTGACGAATAA 1293 0.447 MSSSTRGEQHQTVPLSVLLKRELLSEKIERPEIVHGQACHSKKGEDFTLLKTDRQRLVGDGVSTYSVFGLFDGHNGSAAAIYTKENLLDNVLSAIPPDLNRDEWVAALPRALVAGFVKTDKDFQQKAQKSGTTVTFVIVDGWVVTVASVGDSRCVLESSEGGIYYLSADHRLETNEEERVRIRSSGGEVGRLNTGGGAEVGPLRCWPGGLCLSRSIGDMDIGEFIVPVPYVKQVKLSTGGGRLVICSDGVWDALSAEVALDSCHGMPAEAAAPHVVKEAVQAKGLRDDTTCIVVDILPQEKPPTSVPHTKKPVKVMLKSMFRKKSSESSYIDKEYLEADVVEELFEEGSAMLSERLDTKYPLCNMFKLFMCAVCQVEIKPGEGISIHEGEPIPGKSRPWDGPFLCASCQEKKEAMEGKGVSGRVSSGSDE 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0626 430 Gene3D - 34 303 IPR036457 -
Lal8g0626 430 SMART PP2C_4 29 294 IPR001932 -
Lal8g0626 430 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 8 425 - -
Lal8g0626 430 SMART PP2C_SIG_2 57 296 IPR001932 -
Lal8g0626 430 Pfam Protein phosphatase 2C 60 278 IPR001932 -
Lal8g0626 430 CDD PP2Cc 42 296 IPR001932 -
Lal8g0626 430 ProSiteProfiles PPM-type phosphatase domain profile. 27 296 IPR001932 -
Lal8g0626 430 PANTHER ALPHABET, ISOFORM E-RELATED 8 425 - -
Lal8g0626 430 SUPERFAMILY PP2C-like 41 296 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0626 Lal-Chr8 4347402 4353235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0626 4 429 PP2C-type Phosphatase Gene Family AT1G47380 78.271 0.0 684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0626 8 4347402 4353235 Lal8g0626 8 4347402 4353235 ECH
Lal8g0626 8 4347402 4353235 Lal10g0809 10 15774863 15780643 LSH