Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0611 ATGTTCACCAATTCTCACCAAGTCCTGAGAGCCTTAGCTCCTTTGCAAGAACCAGACCTCTCCTTAAACATAAGCCCACCCTTTATTTCAGAATCTGAACCCAAAGTGGGAAGCTTCAATAAAAGCCTTTACAATGATATGTGCTCAACTTCTGACTCAGGTAGTAGTGGAAGTGAACTAAGCCATGAGAATAATAATAATGGTTTTTTTCACCTTGGTACTCATCATCATGGCGAACCAACTTTGAGCTTAGGCTTGGAAACCAAAGGTTTGAATCCCCATGTACCAATACAACAAGGAGTCTCAAGAAACTTCAATCACCACAACTTCCAACCTCAAATCTATGTCCGCGATTTCAAACGAAATGCAAGAATCGTTCATGGTGTTAAAAGGAGTGTTAGAGCCCCTAGGATGAGATGGACAACCACCCTCCATGCTCATTTTGTTCATGCGGTTCAGCTACTTGGTGGTCATGAAAGGGCAACTCCAAAGTCTGTTTTAGAGTTAATGAATGTTAAGGATCTAACCCTAGCACACGTCAAGAGTCACTTGCAGATGTATAGAACAGTGAAGAGCACTGTCAAAGGCACAGGTCCTGAACAGATCACAGATATGGGCTTAAGCACAAGGCCAGAGATTACCAATAATCTGCATAATGAAGTTTCAGCTTGTGATGAGAGAAGAACCAATTTATCACACCAGTTGAGGTCACCTTGGCAATCATCATCAATGGAGACAAATACAAACAATAGTAGACAAAAAACTGAAATTGGTTTGGTGTATTCTAATCTCAAGGGAAATGAAACCATGGTTAATGGGCAAAATTATGTATGCCAGTCAAATTTCATGAAGGAAAGATTGGACTCTAGCCCTTTGTCACGTTCTGAAGCGATTCTTAACTTAGAATTCACCCTTGGAAGGTCCAATTGGGAAGCTGAGCATGCTGAATCATCAAGAGAGTTAACTCTTCTCAAGTGTTAA 981 0.4088 MFTNSHQVLRALAPLQEPDLSLNISPPFISESEPKVGSFNKSLYNDMCSTSDSGSSGSELSHENNNNGFFHLGTHHHGEPTLSLGLETKGLNPHVPIQQGVSRNFNHHNFQPQIYVRDFKRNARIVHGVKRSVRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTVKGTGPEQITDMGLSTRPEITNNLHNEVSACDERRTNLSHQLRSPWQSSSMETNTNNSRQKTEIGLVYSNLKGNETMVNGQNYVCQSNFMKERLDSSPLSRSEAILNLEFTLGRSNWEAEHAESSRELTLLKC 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0611 326 MobiDBLite consensus disorder prediction 50 71 - -
Lal8g0611 326 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 326 IPR044847 GO:0000976|GO:0006355|GO:0010158
Lal8g0611 326 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 136 189 IPR006447 GO:0003677
Lal8g0611 326 Pfam Myb-like DNA-binding domain 137 188 IPR001005 -
Lal8g0611 326 SUPERFAMILY Homeodomain-like 133 190 IPR009057 -
Lal8g0611 326 MobiDBLite consensus disorder prediction 50 74 - -
Lal8g0611 326 Gene3D - 135 192 - -
Lal8g0611 326 MobiDBLite consensus disorder prediction 233 253 - -
Lal8g0611 326 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0611 Lal-Chr8 4248791 4253307 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal8g0611 Myb_DNA-binding 1.4e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0611 8 4248791 4253307 Lal8g0611 8 4248791 4253307 ECH
Lal8g0611 8 4248791 4253307 Lal25g0567 25 4198004 4203025 LSH
Lal8g0611 8 4248791 4253307 Lal21g0167 21 1121791 1123450 PCT
Lal21g0167 21 1121791 1123450 Lal8g0611 8 4248791 4253307 PCT