LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal8g0610	ATGCTAAGAGACGAAATCGTTGGTTCAAGGAGTGCGAGGCATAGCAGTACCACCACCGTATCGAATAAAGTTCTGGTGGCGGTGAAGGCGGAGAGAGTTATCTCCAACACCGCATTGGCTTGGGCACTCACTCATGTCGTTCACTCAAGCGATTCTATCACTCTCCTCGCTGTCTATTCTGCTGAGAAAACTGGGAGAAGATTCTGGAGTTTTTCGAAACTTACTGGAGACTGTTCGAGTAGCCGTCCGGGGAAGTTGCCGGAGCGGATTTCTGATATCTCCGAATCTTGTTCTCAGATGATCCTCCAATTGCAAAATCAAATTGAGGTTAGAGTTAAGATTAAGGTGGTCACGGGTACTCCCAGTGGTGCTGTAGCTGCTGAAGCAAGATGGAGTGGCTCCCAGTGGGTCATACTGGACAAGAAATTAAAGCAAGAAGTAAAGCATTGCATGGATGAACTCCAGTGTAGCATTGTGGTGATGAATGGCTCACATCCAAAAATCCTCAGGCTTAACTTAGAATGCTCAGATGAACTTCAAACTCCTTTTTACTCTGCTGCTTCTTCACCAGGTATAGAAATTGGAAAGCTAAAAGATTACAGGTTGAAGCATTCCACGCCAGTGAGTAGCCCTGAAGAAGCAGGTACCTCTGTTACCAGAACCATTGGAGTAAATTCAGTGTCAAGTTATGACTCGGTGACTTCTCTTTTCCTAGTCTACAAACAAAACCCTCTGTACGAAGGTCAGGGACCACAGAAAAGGACACACACACAAATCTATGAGGTAAAAGATTCATTTAACGTCCAACCACCACTATACTTTGATGTAGAAAGGGATACATCTCCCACTTCGTGGGCACGCCCAACGTCATCATCTGTGTCTAATGATAACAAGAGTGCATTTTGGACTCCTCAAAATAACATTATGAATGAGAAGCTTAAGAAACCTGAAAACAACAGAACTATCCAAAGAACAAAATCTCCAAATTCTAAAACTTTACTTGAGAATTTTATTCATTGTGATCAAGAAGTGAGGACAAATGAACTTGGGTTTAAGTTTAACCACGATCAAAGTAGAAGTTATGTCACTAACTCATCCAGCAGAGATAATACCATTCCTTTGGGAAGAACTCGTTCTATACCTCCTCCCTTATGCTCCCGGTGTCAGAATAAAGCACCATTGTTTGGAAAGCCTCCGAGACGGTTTTCTTATGATGAGCTAGAAGAAGCTACTGATATGTTCGCAGATGTGAATTTTATAGCTGAAGGTGGATTTGGTGTAGTTCACAAAGGAATACTCAGAGACGGCCAAGTTGTTGCAGTCAAACAGTTAAAGTTCAGTGGCTCTCAAGCTGATCTTGATTTCTGCAGGGAAGTTAGGCTTTTGAGCTGTGCACAACACAGAAATGTTGTATTGCTGATAGGATTTTGTACAGAGGGAAACTTGAGGATATTAGTTTATGAATATATATGCAATGGATCTTTGGACCTCTACTTACAAGGAGAGAGTATGCTTTTGGATTGCAACTCACGCTTAAAGATAGCGATTGGAGTTGCACGAGGATTGCGCTACCTTCATGAAGATTGTAGAGTTGGTTCTATAGTGCACAGAGATCTTCGACCCAGAAATATACTCTTAACCCATGACTTTGAACCTCTGGTGGCTGATTTTGGGCTTGCTAGATGGCACACAGAATGGAATATAAATACTGAAGATCGAGTTATAGGATCTTCTGGGTATCTTGCACCAGAGTATCTTGAAGCTGGAAATCTTACATATAAAGTGGATGTATATGCATTTGGAATTGTTTTACTTGAGTTAATAACAGGTCGCAGAATTTGTGACTTGGAACGTTTCAATGGACACTGCTTTCTTTCTGAATGGTTTCACCCTCTACGCATGTTGGAGCCCAATCACATCATAGAAAATGTTCGATCTCTCAACACATGTTTTGATTCTAAGGCTTCATTGGAATTTAATCTTCCACTACAAGCTATGGCACGAGCTGCTTCATTGTGTCTACGCCTGGATCCTGATGCCAGACCTCCAATGTCAAAGATCCTCATAGTGCTGGAAGGGGGTGATTCAATTCGTCCTATGGGTCTAGACTTCAACTCAGTTGGTAACACAAGTGGCCATTTAAGAGGGTTGACATCGCATACTTCACCTAAAGGTACAATAAGTCATTCCCGTGGACTATCACACTGA	2208	0.4221	MLRDEIVGSRSARHSSTTTVSNKVLVAVKAERVISNTALAWALTHVVHSSDSITLLAVYSAEKTGRRFWSFSKLTGDCSSSRPGKLPERISDISESCSQMILQLQNQIEVRVKIKVVTGTPSGAVAAEARWSGSQWVILDKKLKQEVKHCMDELQCSIVVMNGSHPKILRLNLECSDELQTPFYSAASSPGIEIGKLKDYRLKHSTPVSSPEEAGTSVTRTIGVNSVSSYDSVTSLFLVYKQNPLYEGQGPQKRTHTQIYEVKDSFNVQPPLYFDVERDTSPTSWARPTSSSVSNDNKSAFWTPQNNIMNEKLKKPENNRTIQRTKSPNSKTLLENFIHCDQEVRTNELGFKFNHDQSRSYVTNSSSRDNTIPLGRTRSIPPPLCSRCQNKAPLFGKPPRRFSYDELEEATDMFADVNFIAEGGFGVVHKGILRDGQVVAVKQLKFSGSQADLDFCREVRLLSCAQHRNVVLLIGFCTEGNLRILVYEYICNGSLDLYLQGESMLLDCNSRLKIAIGVARGLRYLHEDCRVGSIVHRDLRPRNILLTHDFEPLVADFGLARWHTEWNINTEDRVIGSSGYLAPEYLEAGNLTYKVDVYAFGIVLLELITGRRICDLERFNGHCFLSEWFHPLRMLEPNHIIENVRSLNTCFDSKASLEFNLPLQAMARAASLCLRLDPDARPPMSKILIVLEGGDSIRPMGLDFNSVGNTSGHLRGLTSHTSPKGTISHSRGLSH	735

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal8g0610	735	MobiDBLite	consensus disorder prediction	282	301	-	-
	Lal8g0610	735	PANTHER	ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE	18	726	-	-
	Lal8g0610	735	SUPERFAMILY	Protein kinase-like (PK-like)	399	692	IPR011009	-
	Lal8g0610	735	ProSitePatterns	Tyrosine protein kinases specific active-site signature.	534	546	IPR008266	GO:0004672\|GO:0006468
	Lal8g0610	735	MobiDBLite	consensus disorder prediction	279	301	-	-
	Lal8g0610	735	MobiDBLite	consensus disorder prediction	713	735	-	-
	Lal8g0610	735	ProSiteProfiles	Protein kinase domain profile.	414	697	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lal8g0610	735	Pfam	Protein tyrosine and serine/threonine kinase	420	652	IPR001245	GO:0004672\|GO:0006468
	Lal8g0610	735	SMART	tyrkin_6	414	691	IPR020635	GO:0004713\|GO:0006468
	Lal8g0610	735	Gene3D	HUPs	7	168	IPR014729	-
	Lal8g0610	735	Gene3D	Transferase(Phosphotransferase) domain 1	490	698	-	-
	Lal8g0610	735	Gene3D	Phosphorylase Kinase; domain 1	384	489	-	-
	Lal8g0610	735	PANTHER	OS01G0253100 PROTEIN	18	726	IPR045271	GO:0004714\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal8g0610	Lal-Chr8	4238436	4243942	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_PERK-2	Lal8g0610		PK_Tyr_Ser-Thr	3.6e-42	CL0016

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal8g0610	8	4238436	4243942	Lal8g0610	8	4238436	4243942	ECH